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L3_072_000G1_scaffold_135

Search features with annotation key words

Displaying items 1-30 of 303 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_135_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(87..455)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FR24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94886.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_072_000G1_scaffold_135_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(725..910)
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WTP5_9FIRM
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EEA83487.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_072_000G1_scaffold_135_3
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1411..1743)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7G6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35619.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_072_000G1_scaffold_135_4
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1692..1862)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7G6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35619.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_072_000G1_scaffold_135_5
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1892..2314)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35618.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_000G1_scaffold_135_6
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2307..2894)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35617.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_000G1_scaffold_135_7
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2976..3572)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8J1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35616.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_000G1_scaffold_135_8
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3826..4917)
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HE40_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00386.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Site-specific recombinase XerD
L3_072_000G1_scaffold_135_9
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5024..5215)
DNA (192bp) protein (64aa)
DNA binding domain, excisionase family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FXY7_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:EEG92571.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_072_000G1_scaffold_135_10
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5187..5636)
DNA (450bp) protein (150aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KRT4_9FIRM
dUTP pyrophosphatase
L3_072_000G1_scaffold_135_11
unknown

Not on your lists

comp(5623..5946)
DNA (324bp) protein (108aa)

This feature has no annotations

L3_072_000G1_scaffold_135_12
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5971..6618)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YNZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59252.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_072_000G1_scaffold_135_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6625..6900)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXJ7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN79498.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_072_000G1_scaffold_135_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6916..7473)
DNA (558bp) protein (186aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.17.4.2 1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXJ8_RUMGN
L3_072_000G1_scaffold_135_15
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7475..8572)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AZU7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ34822.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
numod4 motif family protein
L3_072_000G1_scaffold_135_16
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8631..10874)
DNA (2244bp) protein (748aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YNZ3_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EPD59247.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_072_000G1_scaffold_135_17
unknown

Not on your lists

comp(10892..11119)
DNA (228bp) protein (76aa)

This feature has no annotations

L3_072_000G1_scaffold_135_18
unknown

Not on your lists

comp(11067..11234)
DNA (168bp) protein (56aa)

This feature has no annotations

L3_072_000G1_scaffold_135_19
unknown

Not on your lists

comp(11251..11679)
DNA (429bp) protein (143aa)

This feature has no annotations

L3_072_000G1_scaffold_135_20
unknown

Not on your lists

comp(11676..11849)
DNA (174bp) protein (58aa)

This feature has no annotations

L3_072_000G1_scaffold_135_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11862..12401)
DNA (540bp) protein (180aa)
Guanylate kinase {ECO:0000313|EMBL:EDN79502.1}; EC=2.7.4.8 {ECO:0000313|EMBL:EDN79502.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
similar to guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXK1_RUMGN
L3_072_000G1_scaffold_135_22
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12406..12654)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FYT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE19806.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
hypothetical protein
L3_072_000G1_scaffold_135_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12668..13363)
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JQ60_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95229.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_072_000G1_scaffold_135_24
unknown

Not on your lists

comp(13342..13569)
DNA (228bp) protein (76aa)

This feature has no annotations

L3_072_000G1_scaffold_135_25
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13603..15585)
DNA (1983bp) protein (661aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
DNA ligase n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N1ZYU5_9FIRM
putative NAD-dependent DNA ligase
L3_072_000G1_scaffold_135_26
unknown

Not on your lists

comp(15578..15799)
DNA (222bp) protein (74aa)

This feature has no annotations

L3_072_000G1_scaffold_135_27
unknown

Not on your lists

comp(15805..16008)
DNA (204bp) protein (68aa)

This feature has no annotations

L3_072_000G1_scaffold_135_28
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16013..16735)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FVQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93321.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_072_000G1_scaffold_135_29
unknown

Not on your lists

comp(16725..16907)
DNA (183bp) protein (61aa)

This feature has no annotations

L3_072_000G1_scaffold_135_30
unknown

Not on your lists

comp(16985..17149)
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying items 1-30 of 303 in total

View Taxonomy