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L3_072_000G1_scaffold_148

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_148_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..2344
DNA (2343bp) protein (781aa)
Translation initiation factor IF-2 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R784_CLOSW
translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_148_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2433..2795
DNA (363bp) protein (121aa)
Ribosome-binding factor A n=2 Tax=Clostridium RepID=D3AKT3_9CLOT
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ribosome-binding factor A
L3_072_000G1_scaffold_148_3
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2808..3758
DNA (951bp) protein (317aa)
Phosphoesterase RecJ domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R782_CLOSW
Exopolyphosphatase-like enzyme {ECO:0000313|EMBL:EXG88082.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
phosphoesterase RecJ domain-containing protein
L3_072_000G1_scaffold_148_4
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3770..4672
DNA (903bp) protein (301aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
tRNA pseudouridine synthase B n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R781_CLOSW
tRNA pseudouridine synthase B
L3_072_000G1_scaffold_148_5
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4675..5628
DNA (954bp) protein (318aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
Riboflavin biosynthesis protein RibF n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R780_CLOSW
riboflavin biosynthesis protein RibF
L3_072_000G1_scaffold_148_6
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5686..6729
DNA (1044bp) protein (348aa)
NLP/P60 protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R779_CLOSW
Cell wall-associated hydrolase, invasion-associated protein {ECO:0000313|EMBL:EXG88079.1}; Flags: Precursor;; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
NLP/P60 protein
L3_072_000G1_scaffold_148_7
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6857..8935)
DNA (2079bp) protein (693aa)
Secreted metalloprotease n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MUX7_CLOSA
secreted metalloprotease
Secreted metalloprotease {ECO:0000313|EMBL:AGX43431.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_000G1_scaffold_148_8
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9275..9985)
DNA (711bp) protein (237aa)
ABC transporter related protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R778_CLOSW
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADL05510.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_148_9
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9972..10838)
DNA (867bp) protein (289aa)
ABC transporter related protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R777_CLOSW
ABC transporter {ECO:0000313|EMBL:KEZ90801.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ABC transporter
L3_072_000G1_scaffold_148_10
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10838..11941)
DNA (1104bp) protein (368aa)
Inner-membrane translocator n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R776_CLOSW
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADL05508.1}; Flags: Precursor;; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_148_11
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11952..12833)
DNA (882bp) protein (294aa)
Inner-membrane translocator n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R775_CLOSW
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADL05507.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_148_12
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12956..14137)
DNA (1182bp) protein (394aa)
Extracellular ligand-binding receptor n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R774_CLOSW
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:EXG88074.1}; Flags: Precursor;; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
extracellular ligand-binding receptor
L3_072_000G1_scaffold_148_13
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14341..15945)
DNA (1605bp) protein (535aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R773_CLOSW
L3_072_000G1_scaffold_148_14
unknown

Not on your lists

16088..16183
DNA (96bp) protein (32aa)

This feature has no annotations

L3_072_000G1_scaffold_148_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16371..17630
DNA (1260bp) protein (420aa)
Basic membrane protein A n=2 Tax=Clostridium RepID=N9Z3T3_9CLOT
Basic membrane protein A {ECO:0000313|EMBL:ENZ14667.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
nucleoside-binding protein
L3_072_000G1_scaffold_148_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17747..19276
DNA (1530bp) protein (510aa)
nucleoside ABC transporter ATP-binding protein (EC:3.6.3.17)
Sugar ABC transporter ATP-binding protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZG94_9CLOT
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ38895.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L3_072_000G1_scaffold_148_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19273..20373
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJ64_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42183.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
nucleoside ABC transporter membrane protein
L3_072_000G1_scaffold_148_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20390..21370
DNA (981bp) protein (327aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJP9_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEQ57925.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
nucleoside ABC transporter membrane protein
L3_072_000G1_scaffold_148_19
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21511..23487
DNA (1977bp) protein (659aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R772_CLOSW
L3_072_000G1_scaffold_148_20
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23714..25864
DNA (2151bp) protein (717aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000361F61E
Methyl-accepting chemotaxis protein signaling domain protein {ECO:0000313|EMBL:EDS09151.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
methyl-accepting chemotaxis sensory transducer
L3_072_000G1_scaffold_148_21
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26111..27472
DNA (1362bp) protein (454aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R771_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:KEZ90797.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L3_072_000G1_scaffold_148_22
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27469..28119
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R770_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:KEZ90796.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L3_072_000G1_scaffold_148_23
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28100..31468
DNA (3369bp) protein (1123aa)
SMC domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R769_CLOSW
SMC domain-containing protein
SMC domain protein {ECO:0000313|EMBL:ADL05501.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_148_24
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31592..32044)
DNA (453bp) protein (151aa)
GCN5-related N-acetyltransferase n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SUD0_SYNGF
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADY56580.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
L3_072_000G1_scaffold_148_25
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32708..35533
DNA (2826bp) protein (942aa)
UvrABC system protein A n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R756_CLOSW
excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_148_26
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36086..37627
DNA (1542bp) protein (514aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R755_CLOSW
GMP synthase
L3_072_000G1_scaffold_148_27
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

38183..39616
DNA (1434bp) protein (478aa)
UPF0061 protein I532_19871 n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DBW4_9BACL
hypothetical protein
UPF0061 protein PDUR_23920 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=44251 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus (Paenibacillus azotofixans).;"
L3_072_000G1_scaffold_148_28
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39872..40336
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003798909
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABR33574.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_072_000G1_scaffold_148_29
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40354..41658
DNA (1305bp) protein (435aa)
Palmitoyl-CoA hydrolase {ECO:0000313|EMBL:AGY74947.1}; EC=3.1.2.2 {ECO:0000313|EMBL:AGY74947.1};; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035E0262
acyl-CoA thioesterase 1
L3_072_000G1_scaffold_148_30
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41731..43131)
DNA (1401bp) protein (467aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PRT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ86663.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
Ykud domain-containing protein
Displaying items 1-30 of 88 in total

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