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L3_072_000G1_scaffold_162

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_162_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..835)
DNA (834bp) protein (278aa)
Signal transduction histidine kinase n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LWY4_9FIRM
Signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:CBL22137.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_072_000G1_scaffold_162_2
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(823..1485)
DNA (663bp) protein (221aa)
Response regulator receiver domain protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SUY8_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDP26016.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_072_000G1_scaffold_162_3
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1540..2289)
DNA (750bp) protein (250aa)
Bacteriocin ABC transporter n=2 Tax=Paenibacillus polymyxa RepID=E3E650_PAEPS
bacteriocin ABC transporter
Bacteriocin ABC transporter {ECO:0000313|EMBL:ADO56735.1}; TaxID=886882 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa).;"
L3_072_000G1_scaffold_162_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2289..3023)
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0I0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27540.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_072_000G1_scaffold_162_5
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3016..3729)
DNA (714bp) protein (238aa)
Lantibiotic protection ABC transporter, ATP-binding subunit n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EW21_9FIRM
Lantibiotic protection ABC transporter, ATP-binding subunit {ECO:0000313|EMBL:EEG36564.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
ABC-type multidrug transport system, ATPase component
L3_072_000G1_scaffold_162_6
unknown

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3949..4527
DNA (579bp) protein (193aa)

This feature has no annotations

L3_072_000G1_scaffold_162_7
unknown

Not on your lists

comp(4638..5342)
DNA (705bp) protein (235aa)

This feature has no annotations

L3_072_000G1_scaffold_162_8
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5642..6247)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JF03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS29722.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
uracil-DNA glycosylase
L3_072_000G1_scaffold_162_9
unknown

Not on your lists

comp(6373..6486)
DNA (114bp) protein (38aa)

This feature has no annotations

L3_072_000G1_scaffold_162_10
Tetragenococcus halophilus, Tetragenococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6586..7416)
DNA (831bp) protein (277aa)
putative methyltransferase (EC:2.1.1.-)
Putative methyltransferase {ECO:0000313|EMBL:BAK94342.1}; EC=2.1.1.- {ECO:0000313|EMBL:BAK94342.1};; TaxID=945021 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Tetragenococcus.;" source="Tetragenococcus halophilus (strain DSM 20338 / JCM 20259 / NCIMB 9735; / NBRC 12172) (Pediococcus halophilus).;"
Putative methyltransferase n=1 Tax=Tetragenococcus halophilus (strain DSM 20338 / JCM 20259 / NCIMB 9735 / NBRC 12172) RepID=G4L718_TETHN
L3_072_000G1_scaffold_162_11
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7548..8138
DNA (591bp) protein (197aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R752_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:KEZ90775.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
isoprenylcysteine carboxyl methyltransferase
L3_072_000G1_scaffold_162_12
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8247..9776)
DNA (1530bp) protein (510aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GUX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX67149.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_072_000G1_scaffold_162_13
Paenibacillus sp. FSL R7-0273, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10200..10958)
DNA (759bp) protein (253aa)
ABC transporter ATP-binding protein n=1 Tax=Bacillus fordii RepID=UPI0003748C59
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIQ48468.1}; TaxID=1536772 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0273.;"
L3_072_000G1_scaffold_162_14
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10962..13280)
DNA (2319bp) protein (773aa)
ABC transporter permease n=1 Tax=Paenibacillus terrigena RepID=UPI000376C407
ABC transporter permease {ECO:0000313|EMBL:EPY04485.1}; TaxID=1117108 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei TS-15.;"
ABC transporter permease
L3_072_000G1_scaffold_162_15
Paenibacillus borealis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13247..14563)
DNA (1317bp) protein (439aa)
macrolide transporter n=1 Tax=Paenibacillus terrigena RepID=UPI000379DD62
macrolide transporter
Macrolide transporter {ECO:0000313|EMBL:AIQ57959.1}; TaxID=160799 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus borealis.;"
L3_072_000G1_scaffold_162_16
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14553..15197)
DNA (645bp) protein (215aa)
Transcriptional regulator, TetR family n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1YCP7_ANEAE
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERI09867.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus aneurinilyticus ATCC 12856.;"
TetR family transcriptional regulator
L3_072_000G1_scaffold_162_17
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15395..15817
DNA (423bp) protein (141aa)
Acetyltransferase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KJQ6_9FIRM
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGL00765.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
L3_072_000G1_scaffold_162_18
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15902..16726)
DNA (825bp) protein (275aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3B1_CLOSW
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EXG87109.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
MerR family transcriptional regulator
L3_072_000G1_scaffold_162_19
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16813..17397)
DNA (585bp) protein (195aa)
Transcriptional regulator, XRE family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8J6_CLOSW
Putative transcription factor, MBF1 like protein {ECO:0000313|EMBL:EXG88253.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
XRE family transcriptional regulator
L3_072_000G1_scaffold_162_20
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17420..17704)
DNA (285bp) protein (95aa)
transcriptional regulator n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2F603
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:EXG87618.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
transcriptional regulator
L3_072_000G1_scaffold_162_21
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17688..18044)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8J7_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL05726.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_162_22
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18227..18748)
DNA (522bp) protein (174aa)
Peptidoglycan-binding lysin domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8J8_CLOSW
peptidoglycan-binding lysin domain-containing protein
Peptidoglycan-binding lysin domain protein {ECO:0000313|EMBL:ADL05727.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_162_23
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18799..19128
DNA (330bp) protein (110aa)
Uncharacterized protein (Fragment) n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0JA72_ALCFA
Uncharacterized protein {ECO:0000313|EMBL:EJC60849.1}; Flags: Fragment;; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis subsp. faecalis NCIB 8687.;"
hypothetical protein
L3_072_000G1_scaffold_162_24
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20092..22617
DNA (2526bp) protein (842aa)
Diguanylate cyclase and metal dependent phosphohydrolase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8J9_CLOSW
Diguanylate cyclase {ECO:0000313|EMBL:KEZ91782.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
diguanylate cyclase and metal dependent phosphohydrolase
L3_072_000G1_scaffold_162_25
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22799..23272
DNA (474bp) protein (158aa)
peroxiredoxin (EC:1.11.1.15)
Glutathione peroxidase n=1 Tax=Clostridium sp. MSTE9 RepID=J1H8H3_9CLOT
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L3_072_000G1_scaffold_162_26
Fibrobacter succinogenes, Fibrobacter, Fibrobacterales, Fibrobacteria, Fibrobacteres, Bacteria

Not on your lists

23315..24064
DNA (750bp) protein (250aa)
Beta-lactamase domain protein n=1 Tax=Fibrobacter succinogenes (strain ATCC 19169 / S85) RepID=C9RMU0_FIBSS
metallo-beta-lactamase family protein
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:ADL25517.1}; TaxID=59374 species="Bacteria; Fibrobacteres; Fibrobacterales; Fibrobacteraceae; Fibrobacter.;" source="Fibrobacter succinogenes (strain ATCC 19169 / S85).;"
L3_072_000G1_scaffold_162_27
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24079..25752)
DNA (1674bp) protein (558aa)
Signal transduction four helix bundle sensory module n=1 Tax=Clostridium sp. MSTE9 RepID=J1H545_9CLOT
Signal transduction four helix bundle sensory module {ECO:0000313|EMBL:EJF40640.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
methyl-accepting chemotaxis sensory transducer
L3_072_000G1_scaffold_162_28
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25944..27074)
DNA (1131bp) protein (377aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. MSTE9 RepID=J1GZA7_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EJF38480.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
integrase family protein
L3_072_000G1_scaffold_162_29
unknown

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comp(27250..27351)
DNA (102bp) protein (34aa)

This feature has no annotations

L3_072_000G1_scaffold_162_30
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27760..29118
DNA (1359bp) protein (453aa)
FAD linked oxidase domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8K0_CLOSW
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:ADL05729.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
Displaying items 1-30 of 102 in total

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