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L3_072_000G1_scaffold_169

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Displaying items 1-30 of 259 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_169_1
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..307)
DNA (306bp) protein (102aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=7 Tax=Bifidobacterium bifidum RepID=E3EQQ5_BIFBS
Enolase {ECO:0000313|EMBL:CDB22340.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_000G1_scaffold_169_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(505..1317)
DNA (813bp) protein (271aa)
pabC; aminodeoxychorismate lyase (EC:4.1.3.38)
Branched-chain amino acid aminotransferase n=8 Tax=Bifidobacterium RepID=E3EQQ4_BIFBS
Aminotransferase, class IV {ECO:0000313|EMBL:ERI83197.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_072_000G1_scaffold_169_3
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1286..2803)
DNA (1518bp) protein (506aa)
para-aminobenzoate synthase subunit I (EC:2.6.1.85)
Putative para-aminobenzoate synthase, subunit I n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P130_BIFBP
Para-aminobenzoate synthase subunit I {ECO:0000313|EMBL:CDB22342.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_000G1_scaffold_169_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2800..6399)
DNA (3600bp) protein (1200aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Transcription-repair-coupling factor n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CF99_BIFBI
mfd; transcription-repair coupling factor
L3_072_000G1_scaffold_169_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6389..6988)
DNA (600bp) protein (200aa)
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Peptidyl-tRNA hydrolase n=7 Tax=Bifidobacterium bifidum RepID=E3EQ21_BIFBS
L3_072_000G1_scaffold_169_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6992..7546)
DNA (555bp) protein (185aa)
Toxin-antitoxin system, toxin component, GNAT family n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CGP7_BIFBI
N-acetyltransferase {ECO:0000313|EMBL:BAQ97908.1}; Toxin-antitoxin system, toxin component, GNAT family {ECO:0000313|EMBL:ERI83193.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
phosphinothricin N-acetyltransferase
L3_072_000G1_scaffold_169_7
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7900..8691)
DNA (792bp) protein (264aa)
ABC transporter ATP-binding protein (EC:3.6.3.40)
Teichoic acid transport system, ATP-binding protein n=7 Tax=Bifidobacterium RepID=E3EQ19_BIFBS
ATP-binding protein ABC transporter system for polysaccharides {ECO:0000313|EMBL:CDB23058.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_000G1_scaffold_169_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8681..9487)
DNA (807bp) protein (269aa)
Teichoic acid translocation permease protein n=4 Tax=Bifidobacterium RepID=I3WHC8_BIFBI
tagG; teichoic acid translocation permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_000G1_scaffold_169_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9541..10584)
DNA (1044bp) protein (348aa)
NAD-dependent epimerase/dehydratase family protein (EC:4.1.1.35)
NAD-dependent epimerase/dehydratase family protein n=5 Tax=Bifidobacterium bifidum RepID=E4P124_BIFBP
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:ERI83189.1}; Putative dehydratase {ECO:0000313|EMBL:BAQ97905.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_072_000G1_scaffold_169_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10611..11327)
DNA (717bp) protein (239aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
ispD; 2-C-methyl-D-erythritol 4-phosphatecytidylyl transferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M6N2_BIFBI
L3_072_000G1_scaffold_169_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11469..12014)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GCA6_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52937.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_169_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12004..13191)
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P121_BIFBP
hypothetical protein
Acyltransferase {ECO:0000313|EMBL:EFR50083.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_072_000G1_scaffold_169_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13194..15080)
DNA (1887bp) protein (629aa)
tagB; teichoic acid biosynthesis protein B tagB (EC:2.7.8.14)
Teichoic acid biosynthesis protein B TagB n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P120_BIFBP
Glycosyl/glycerophosphate transferase {ECO:0000313|EMBL:EKF15612.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_072_000G1_scaffold_169_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15213..16334
DNA (1122bp) protein (374aa)
glycosyl transferase, group 2 family protein (EC:2.7.8.14)
Glycosyl transferase, group 2 family protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P119_BIFBP
Putative ribitolphospho transferase {ECO:0000313|EMBL:AFL04284.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_000G1_scaffold_169_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16840..20103)
DNA (3264bp) protein (1088aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=I3WHC0_BIFBI
UPF0182 protein BBBF_0691 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L3_072_000G1_scaffold_169_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20286..21506
DNA (1221bp) protein (407aa)
glycoside hydrolase, family 3 domain-containing protein (EC:3.2.1.52)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Glycoside hydrolase, family 3 domain protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P117_BIFBP
L3_072_000G1_scaffold_169_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21521..22603)
DNA (1083bp) protein (361aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0T2_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI83180.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_072_000G1_scaffold_169_18
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22600..23421)
DNA (822bp) protein (274aa)
ABC transporter ATP-binding protein (EC:3.6.3.30)
ATP-binding protein of ABC transporter system n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GCK6_9BIFI
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:CDB22070.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_000G1_scaffold_169_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23418..24518)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2I5R1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52929.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_169_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25034..26401)
DNA (1368bp) protein (456aa)
Acetylornithinedeacetylase/Succinyl-diaminopimelate desuccinylase n=3 Tax=Bifidobacterium RepID=I3WHB5_BIFBI
argE; acetylornithinedeacetylase/Succinyl-diaminopimelate desuccinylase
Acetylornithinedeacetylase/Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:AFL04278.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_000G1_scaffold_169_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26544..27146
DNA (603bp) protein (201aa)
Conserved hypothetical membrane spanning protein n=2 Tax=Bifidobacterium bifidum RepID=E3EQ05_BIFBS
hypothetical protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ADO52927.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_169_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27400..28890
DNA (1491bp) protein (497aa)
Dihydrolipoamide dehydrogenase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQ04_BIFBS
pdhD; dihydrolipoamide dehydrogenase
Dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:ADO52926.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_169_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28996..29793
DNA (798bp) protein (266aa)
Integral membrane protein n=5 Tax=Bifidobacterium RepID=I3WHB2_BIFBI
integral membrane protein
Membrane spanning protein {ECO:0000313|EMBL:KFI42757.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_072_000G1_scaffold_169_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30109..31557
DNA (1449bp) protein (483aa)
glnA; glutamine synthetase, type I (EC:6.3.1.2)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Glutamine synthetase n=8 Tax=Bifidobacterium RepID=E3EQ02_BIFBS
L3_072_000G1_scaffold_169_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31670..31882)
DNA (213bp) protein (71aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=I3WHB0_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04273.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_000G1_scaffold_169_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31888..32916)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=I3WHA9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52922.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_169_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33059..34165)
DNA (1107bp) protein (369aa)
Cell division protein, FtsK/SpoIIIE n=4 Tax=Bifidobacterium RepID=I3WHA8_BIFBI
cell division protein, FtsK/SpoIIIE
Putative ftsK/spoIIIE family protein {ECO:0000313|EMBL:ADO52921.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_169_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34158..34331)
DNA (174bp) protein (58aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=I3WHA7_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52920.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_169_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34328..34726)
DNA (399bp) protein (133aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=I3WHA6_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52919.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_169_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34869..35435
DNA (567bp) protein (189aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=I3WHA5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52918.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Displaying items 1-30 of 259 in total

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