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L3_072_000G1_scaffold_175

Search features with annotation key words

Displaying items 1-30 of 172 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_175_1
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..83)
DNA (81bp) protein (27aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:661 RepID=R5S2M4_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ87485.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
L3_072_000G1_scaffold_175_2
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

322..726
DNA (405bp) protein (135aa)
TIGR03987 family protein n=3 Tax=Bacteroides RepID=A5ZH10_9BACE
TIGR03987 family protein {ECO:0000313|EMBL:CCZ73682.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000G1_scaffold_175_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1220..1720
DNA (501bp) protein (167aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZH11_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73684.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000G1_scaffold_175_4
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1725..3452
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RUQ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA60190.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
hypothetical protein
L3_072_000G1_scaffold_175_5
unknown

Not on your lists

3641..4027
DNA (387bp) protein (129aa)

This feature has no annotations

L3_072_000G1_scaffold_175_6
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4080..5201
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NKP9_ELIME
Uncharacterized protein {ECO:0000313|EMBL:KKB52614.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
L3_072_000G1_scaffold_175_7
unknown

Not on your lists

5289..5402
DNA (114bp) protein (38aa)

This feature has no annotations

L3_072_000G1_scaffold_175_8
Bacteroides finegoldii CAG:203, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5452..6237
DNA (786bp) protein (262aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C9KYE8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC51580.1}; TaxID=1263045 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides finegoldii CAG:203.;"
hypothetical protein
L3_072_000G1_scaffold_175_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6425..6712
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5URB9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73686.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Protein of unknown function (DUF1282).
L3_072_000G1_scaffold_175_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6722..7174
DNA (453bp) protein (151aa)
SsrA-binding protein n=2 Tax=Bacteroides caccae RepID=A5ZH14_9BACE
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
SsrA-binding protein
L3_072_000G1_scaffold_175_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7185..9932
DNA (2748bp) protein (916aa)
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:EDM20724.1}; EC=2.1.1.13 {ECO:0000313|EMBL:EDM20724.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
methionine synthase (B12-dependent) (EC:2.1.1.13)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZH15_9BACE
L3_072_000G1_scaffold_175_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9945..10544
DNA (600bp) protein (200aa)
Nitroreductase family protein n=2 Tax=Bacteroides caccae RepID=A5ZH16_9BACE
Nitroreductase family protein {ECO:0000313|EMBL:EDM20725.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Nitroreductase
L3_072_000G1_scaffold_175_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10616..10741
DNA (126bp) protein (42aa)
Uncharacterized protein n=16 Tax=Bacteroides RepID=A5ZH17_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21386.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000G1_scaffold_175_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10738..12288
DNA (1551bp) protein (517aa)
Transporter, SSS family n=3 Tax=Bacteroides RepID=A5ZH18_9BACE
Solute:sodium symporter (SSS) family transporter {ECO:0000313|EMBL:EIY21387.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Na+/proline symporter
L3_072_000G1_scaffold_175_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12285..13670)
DNA (1386bp) protein (462aa)
Transglycosylase SLT domain protein n=2 Tax=Bacteroides caccae RepID=A5ZH19_9BACE
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EDM20728.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein
L3_072_000G1_scaffold_175_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13708..14361)
DNA (654bp) protein (218aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
uridine kinase (EC:2.7.1.48)
Uridine kinase n=3 Tax=Bacteroides RepID=A5ZH20_9BACE
L3_072_000G1_scaffold_175_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14421..14720
DNA (300bp) protein (100aa)
Stress responsive A/B barrel domain protein n=2 Tax=Bacteroides caccae RepID=A5ZH21_9BACE
Stress responsive A/B barrel domain protein {ECO:0000313|EMBL:EDM20730.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Stress responsive A/B Barrel Domain.
L3_072_000G1_scaffold_175_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14738..16792
DNA (2055bp) protein (685aa)
Cytochrome C biogenesis protein transmembrane region n=3 Tax=Bacteroides RepID=A5ZH22_9BACE
Cytochrome C biogenesis protein transmembrane region {ECO:0000313|EMBL:EDM20731.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Thiol:disulfide interchange protein
L3_072_000G1_scaffold_175_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17027..18343)
DNA (1317bp) protein (439aa)
L-fucose:H+ symporter permease n=3 Tax=Bacteroides RepID=A5ZH23_9BACE
L-fucose:H+ symporter permease {ECO:0000313|EMBL:EDM20732.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L-fucose permease
L3_072_000G1_scaffold_175_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18362..18754)
DNA (393bp) protein (131aa)
hypothetical protein (EC:5.1.3.-)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZH24_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21393.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_072_000G1_scaffold_175_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18762..20192)
DNA (1431bp) protein (477aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.5 2.7.1.51)
Carbohydrate kinase, FGGY family protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZH25_9BACE
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:EDM20734.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_072_000G1_scaffold_175_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20212..20850)
DNA (639bp) protein (213aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8V4M2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73699.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
L3_072_000G1_scaffold_175_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21022..22797)
DNA (1776bp) protein (592aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
fucI; L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U6P3_9BACE
L3_072_000G1_scaffold_175_24
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22867..23862)
DNA (996bp) protein (332aa)
Transcriptional regulator, GntR family n=3 Tax=Bacteroides RepID=A5ZH28_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73701.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
FucR
L3_072_000G1_scaffold_175_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(24124..24525)
DNA (402bp) protein (134aa)
30S ribosomal protein S16 n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZH29_9BACE
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
SSU ribosomal protein S16P
L3_072_000G1_scaffold_175_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24667..25968)
DNA (1302bp) protein (434aa)
Na+/H+ antiporter family protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZH30_9BACE
Na+/H+ antiporter family protein {ECO:0000313|EMBL:EDM20739.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
putative methionine transporter, NhaC family (TC 2.A.35.1.-)
L3_072_000G1_scaffold_175_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26164..27234
DNA (1071bp) protein (357aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Bacteroides caccae RepID=I8V4M6_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EIY21400.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
component of multidrug efflux system
L3_072_000G1_scaffold_175_28
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27245..28909
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UDI4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73704.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
AcrB/AcrD/AcrF family transporter
L3_072_000G1_scaffold_175_29
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28923..30101
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UDI4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73704.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
AcrB/AcrD/AcrF family transporter
L3_072_000G1_scaffold_175_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30104..31408
DNA (1305bp) protein (435aa)
Outer membrane efflux protein n=2 Tax=Bacteroides caccae RepID=A5ZH34_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21402.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
Displaying items 1-30 of 172 in total

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