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L3_072_000G1_scaffold_178

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Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_178_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(222..1145)
DNA (924bp) protein (308aa)
inorganic diphosphatase (EC:3.6.1.1)
DHHA2 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC32_9ACTN
DHHA2 domain protein {ECO:0000313|EMBL:EBA38925.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_072_000G1_scaffold_178_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1314..2267)
DNA (954bp) protein (318aa)
glucokinase (EC:2.7.1.2)
ROK family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8N9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74293.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_072_000G1_scaffold_178_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2509..2841)
DNA (333bp) protein (111aa)
Phosphotransferase system PTS lactose/cellobiose-specific IIA subunit n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N8X6_CORGP
Uncharacterized protein {ECO:0000313|EMBL:KGI74294.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
phosphotransferase system PTS lactose/cellobiose-specific IIA subunit
L3_072_000G1_scaffold_178_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2851..3153)
DNA (303bp) protein (101aa)
PTS system, lactose/cellobiose-specific IIB subunit n=2 Tax=Atopobium RepID=U2TQ45_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74295.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PTS system lactose/cellobiose-specific transporter subunit IIB
L3_072_000G1_scaffold_178_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3314..4657)
DNA (1344bp) protein (448aa)
PTS system, lactose/cellobiose family IIC subunit n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8S7_ATOPD
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PTS system lactose/cellobiose family transporter subunit IIC
L3_072_000G1_scaffold_178_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4778..6178)
DNA (1401bp) protein (467aa)
Glycoside hydrolase family 1 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8S6_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:KGI74297.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
glycoside hydrolase family protein
L3_072_000G1_scaffold_178_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6481..7200
DNA (720bp) protein (240aa)
Transcriptional regulator GntR family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHL7_9ACTN
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDA36029.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
GntR family transcriptional regulator
L3_072_000G1_scaffold_178_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7273..8205
DNA (933bp) protein (311aa)
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EBA38922.1}; EC=5.3.1.8 {ECO:0000313|EMBL:EBA38922.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
mannose-6-phosphate isomerase (EC:5.3.1.8)
Mannose-6-phosphate isomerase, class I n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC29_9ACTN
L3_072_000G1_scaffold_178_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8485..11385)
DNA (2901bp) protein (967aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
UvrD/REP helicase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNW1_9ACTN
UvrD/REP helicase
L3_072_000G1_scaffold_178_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11719..12666)
DNA (948bp) protein (316aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
UDP-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4K8_9ACTN
L3_072_000G1_scaffold_178_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12948..13385
DNA (438bp) protein (146aa)
Universal stress protein n=2 Tax=Collinsella RepID=A4EC26_9ACTN
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
UspA domain-containing protein
L3_072_000G1_scaffold_178_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13698..14741)
DNA (1044bp) protein (348aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHM0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74303.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
integral membrane sensor signal transduction histidine kinase
L3_072_000G1_scaffold_178_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14783..15424)
DNA (642bp) protein (214aa)
Response regulator receiver domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC24_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74304.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
two component transcriptional regulator, winged helix family
L3_072_000G1_scaffold_178_14
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15595..16725)
DNA (1131bp) protein (377aa)
aminotransferase n=1 Tax=Coriobacteriaceae RepID=UPI00034AE913
Uncharacterized protein {ECO:0000313|EMBL:EHF02329.1}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
aspartate/tyrosine/aromatic aminotransferase
L3_072_000G1_scaffold_178_15
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16750..17781)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI00034724CF
Uncharacterized protein {ECO:0000313|EMBL:EHF02328.1}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
ornithine cyclodeaminase, mu-crystallin
L3_072_000G1_scaffold_178_16
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17999..19180
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI00034B0313
sugar diacid utilization regulator
Sugar diacid utilization regulator {ECO:0000313|EMBL:ACV22393.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029; / RHS 1) (Peptococcus heliotrinreducens).;"
L3_072_000G1_scaffold_178_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19199..19909)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC22_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74305.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_072_000G1_scaffold_178_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20157..21764)
DNA (1608bp) protein (536aa)
IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:3.5.4.10 2.1.2.3)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB44_9ACTN
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_072_000G1_scaffold_178_19
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22042..22683
DNA (642bp) protein (214aa)
Acetyltransferase GNAT family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNW7_9ACTN
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDA36041.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
GCN5-related N-acetyltransferase
L3_072_000G1_scaffold_178_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23136..25082)
DNA (1947bp) protein (649aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4L5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74154.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_072_000G1_scaffold_178_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25592..26596
DNA (1005bp) protein (335aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Putative glutamyl-queuosine tRNA(Asp) synthetase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8Q1_9ACTN
glutamyl/glutaminyl-tRNA synthetase
L3_072_000G1_scaffold_178_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26612..27337)
DNA (726bp) protein (242aa)
Ser/Thr phosphatase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHM9_9ACTN
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDA36044.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
putative phosphoesterase, ICC
L3_072_000G1_scaffold_178_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27334..27972)
DNA (639bp) protein (213aa)
Ser/Thr phosphatase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB47_9ACTN
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDA36045.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
putative phosphoesterase or phosphohydrolase
L3_072_000G1_scaffold_178_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28013..28252)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNX1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74157.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_072_000G1_scaffold_178_25
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28454..30898
DNA (2445bp) protein (815aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4M0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36047.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_072_000G1_scaffold_178_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30965..31330
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4M0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36047.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_072_000G1_scaffold_178_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31371..31766)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8Q4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36048.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
putative MutT/nudix family protein
L3_072_000G1_scaffold_178_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32099..32641
DNA (543bp) protein (181aa)
UBA/TS-N domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHN3_9ACTN
UBA/TS-N domain protein {ECO:0000313|EMBL:CDA36049.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ubiquitin-associated-domain-containing protein
L3_072_000G1_scaffold_178_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32660..33445
DNA (786bp) protein (262aa)
Response regulator receiver domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC12_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74161.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein
L3_072_000G1_scaffold_178_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33429..34724
DNA (1296bp) protein (432aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC11_9ACTN
integral membrane sensor signal transduction histidine kinase
Displaying items 1-30 of 76 in total

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