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L3_072_000G1_scaffold_190

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Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_190_1
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..165
DNA (165bp) protein (55aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2C5_CLOSW
Phosphotransferase system Hpr-like protein {ECO:0000313|EMBL:EXG86978.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_072_000G1_scaffold_190_2
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

509..2785
DNA (2277bp) protein (759aa)
SpoIID/LytB domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2C3_CLOSW
SpoIID/LytB domain-containing protein
SpoIID/LytB domain protein {ECO:0000313|EMBL:ADL04773.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_190_3
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2834..4537
DNA (1704bp) protein (568aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2C2_CLOSW
Subtilisin-like serine protease {ECO:0000313|EMBL:EXG86975.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
peptidase S8 and S53 subtilisin kexin sedolisin
L3_072_000G1_scaffold_190_4
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4610..5440
DNA (831bp) protein (277aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2C1_CLOSW
AraC family transcriptional regulator {ECO:0000313|EMBL:KEZ89152.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
AraC family transcriptional regulator
L3_072_000G1_scaffold_190_5
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5530..6540
DNA (1011bp) protein (337aa)
Deoxyguanosinetriphosphate triphosphohydrolase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2C0_CLOSW
deoxyguanosinetriphosphate triphosphohydrolase
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_190_6
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6577..8349
DNA (1773bp) protein (591aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
DNA primase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2B9_CLOSW
DNA primase
L3_072_000G1_scaffold_190_7
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8389..9594
DNA (1206bp) protein (402aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2B8_CLOSW
RpoD subfamily RNA polymerase sigma-70 subunit
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_190_8
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9616..10317
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2B7_CLOSW
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:EXG86970.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_072_000G1_scaffold_190_9
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10304..11101
DNA (798bp) protein (266aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2B6_CLOSW
hypothetical protein
L3_072_000G1_scaffold_190_10
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11113..12774
DNA (1662bp) protein (554aa)
AAA ATPase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2B5_CLOSW
Uridine kinase {ECO:0000313|EMBL:EXG86968.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
AAA ATPase
L3_072_000G1_scaffold_190_11
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13369..14409
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XBC0_9CLOT
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EXG88182.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
transcriptional regulator, LacI family
L3_072_000G1_scaffold_190_12
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14850..16223
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W1Y7_9CLOT
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:EXG88181.1}; Flags: Precursor;; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_072_000G1_scaffold_190_13
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16303..17187
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W2D2_9CLOT
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:EXG88180.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_072_000G1_scaffold_190_14
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17189..18058
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XLZ2_9CLOT
Carbohydrate ABC transporter membrane protein 2, CUT1 family {ECO:0000313|EMBL:EXG88179.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_072_000G1_scaffold_190_15
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18071..19042
DNA (972bp) protein (324aa)
Alpha-N-arabinofuranosidase 2 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIU5_9FIRM
Putative beta-xylosidase {ECO:0000313|EMBL:EXG88178.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
beta-xylosidase
L3_072_000G1_scaffold_190_16
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19168..19836
DNA (669bp) protein (223aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III, epsilon subunit n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R7U2_CLOSW
Exonuclease, DNA polymerase III, epsilon subunit family {ECO:0000313|EMBL:EXG88176.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
L3_072_000G1_scaffold_190_17
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19867..20385
DNA (519bp) protein (173aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R7U0_CLOSW
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADL05594.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_190_18
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20459..20884)
DNA (426bp) protein (142aa)
Aspartate carbamoyltransferase regulatory subunit-like protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2B4_CLOSW
Aspartate carbamoyltransferase regulatory subunit-like protein
Aspartate carbamoyltransferase regulatory subunit-like protein {ECO:0000313|EMBL:ADL04764.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_190_19
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20878..21801)
DNA (924bp) protein (308aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
Aspartate carbamoyltransferase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T594_9CLOT
aspartate carbamoyltransferase
L3_072_000G1_scaffold_190_20
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22042..22782
DNA (741bp) protein (247aa)
ABC transporter related protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2B2_CLOSW
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADL04762.1}; Flags: Precursor;; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_190_21
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22769..24598
DNA (1830bp) protein (610aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2B1_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL04761.1}; Flags: Precursor;; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_190_22
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24588..25943
DNA (1356bp) protein (452aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2B0_CLOSW
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:EXG86963.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_072_000G1_scaffold_190_23
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25985..26845
DNA (861bp) protein (287aa)
IMP cyclohydrolase-like protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZY6_9FIRM
IMP cyclohydrolase-like protein.
IMP cyclohydrolase-like protein {ECO:0000313|EMBL:CBL27346.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_072_000G1_scaffold_190_24
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26860..28038
DNA (1179bp) protein (393aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3)
AICARFT/IMPCHase bienzyme n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9D9_9CLOT
AICARFT/IMPCHase bienzyme {ECO:0000313|EMBL:EEG52062.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L3_072_000G1_scaffold_190_25
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28213..28494
DNA (282bp) protein (94aa)
RNA polymerase sigma factor n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TCR7_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
sigK; sporulation sigma factor SigK
L3_072_000G1_scaffold_190_26
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28604..29893
DNA (1290bp) protein (430aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
Glycoside hydrolase clan GH-D n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SWM9_CLOC7
glycoside hydrolase clan GH-D
L3_072_000G1_scaffold_190_27
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30078..30737
DNA (660bp) protein (220aa)
Cytochrome b5 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2A5_CLOSW
cytochrome b5
Cytochrome b5 {ECO:0000313|EMBL:ADL04755.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_190_28
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30800..30973)
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:EXG86955.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
L3_072_000G1_scaffold_190_29
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31083..32753
DNA (1671bp) protein (557aa)
Resolvase domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2A2_CLOSW
Site-specific recombinase, DNA invertase Pin {ECO:0000313|EMBL:EXG86954.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
resolvase
L3_072_000G1_scaffold_190_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32803..33138
DNA (336bp) protein (112aa)
RNA polymerase sigma factor n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X8Y1_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
Displaying items 1-30 of 75 in total

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