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L3_072_000G1_scaffold_226

Search features with annotation key words

Displaying items 1-30 of 147 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_226_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(81..1055)
DNA (975bp) protein (325aa)
Integrase core domain protein (Fragment) n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUB4_9FIRM
Integrase core domain protein {ECO:0000313|EMBL:EEG93815.1}; Flags: Fragment;; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
insK; transposase InsK
L3_072_000G1_scaffold_226_2
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1055..1456)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93816.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_072_000G1_scaffold_226_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1795..2034
DNA (240bp) protein (80aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=C7GEJ7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU99759.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_072_000G1_scaffold_226_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2111..4324)
DNA (2214bp) protein (738aa)
ABC-type transport system, involved in lipoprotein release, permease component n=3 Tax=Clostridiales RepID=D4LZQ9_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEU99758.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ABC-type transport system, involved in lipoprotein release, permease component
L3_072_000G1_scaffold_226_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4314..5081)
DNA (768bp) protein (256aa)
ABC-type antimicrobial peptide transport system, ATPase component n=3 Tax=Clostridiales RepID=D4LZR0_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBL27270.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_072_000G1_scaffold_226_6
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5193..6206)
DNA (1014bp) protein (338aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Signal transduction histidine kinase n=2 Tax=Clostridiales RepID=D4LZR1_9FIRM
Signal transduction histidine kinase
L3_072_000G1_scaffold_226_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6203..6871)
DNA (669bp) protein (223aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=3 Tax=Clostridiales RepID=D4LZR2_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU99755.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_072_000G1_scaffold_226_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6980..7726)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GEJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99754.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_072_000G1_scaffold_226_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7665..9386)
DNA (1722bp) protein (574aa)
Plasmid mobilization system relaxase n=3 Tax=Clostridiales RepID=D4JMU9_9FIRM
Plasmid mobilization system relaxase {ECO:0000313|EMBL:CBK92303.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
plasmid mobilization system relaxase
L3_072_000G1_scaffold_226_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9343..9714)
DNA (372bp) protein (124aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=T5LWH4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27274.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_072_000G1_scaffold_226_11
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9714..10028)
DNA (315bp) protein (105aa)
Relaxasome subunit MobC n=5 Tax=Clostridiales RepID=D4JMV1_9FIRM
relaxasome subunit MobC
Relaxasome subunit MobC {ECO:0000313|EMBL:CBL27275.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_072_000G1_scaffold_226_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10169..10399)
DNA (231bp) protein (77aa)
DNA binding domain, excisionase family n=24 Tax=root RepID=D4JMV2_9FIRM
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:CBK89672.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_072_000G1_scaffold_226_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10571..11200
DNA (630bp) protein (210aa)
Helix-turn-helix n=3 Tax=Lachnospiraceae RepID=D4LZR7_9FIRM
Helix-turn-helix.
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEU98559.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_072_000G1_scaffold_226_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11287..12582
DNA (1296bp) protein (432aa)
Site-specific recombinase XerD n=3 Tax=Clostridiales RepID=D4LZR8_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBL27278.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_072_000G1_scaffold_226_15
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12911..14134
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:252 RepID=R6K1H0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB67300.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
hypothetical protein
L3_072_000G1_scaffold_226_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14176..15666
DNA (1491bp) protein (497aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAP5_9FIRM
hypothetical protein
L3_072_000G1_scaffold_226_17
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15708..16391
DNA (684bp) protein (228aa)
Two-component system OmpR family phosphate regulon response regulator OmpR n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDW9_9FIRM
Two-component system OmpR family phosphate regulon response regulator OmpR {ECO:0000313|EMBL:CDE36387.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
two-component system OmpR family phosphate regulon response regulator OmpR
L3_072_000G1_scaffold_226_18
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16474..17961
DNA (1488bp) protein (496aa)
Transporter n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBP6_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
neurotransmitter:Na+ symporter
L3_072_000G1_scaffold_226_19
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18041..18874
DNA (834bp) protein (278aa)
Hydrogenase 1 maturation protease n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9P2_9FIRM
Hydrogenase 1 maturation protease {ECO:0000313|EMBL:CDE36389.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hydrogenase 1 maturation protease
L3_072_000G1_scaffold_226_20
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19095..19316)
DNA (222bp) protein (74aa)
Integrase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAJ0_9FIRM
Integrase {ECO:0000313|EMBL:CDE36390.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Site-specific recombinase XerD
L3_072_000G1_scaffold_226_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19409..20467)
DNA (1059bp) protein (353aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Signal transduction histidine kinase n=2 Tax=Eubacterium rectale RepID=D4JPC5_9FIRM
Signal transduction histidine kinase
L3_072_000G1_scaffold_226_22
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20464..21144)
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R5SYP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ51756.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
response regulator
L3_072_000G1_scaffold_226_23
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21238..21381
DNA (144bp) protein (48aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R6UW32_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC74917.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_072_000G1_scaffold_226_24
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21374..22261
DNA (888bp) protein (296aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7AZM5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55162.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
putative iron-sulfur-binding membrane protein
L3_072_000G1_scaffold_226_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22303..23205
DNA (903bp) protein (301aa)
Peroxiredoxin n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E5Q1_9FIRM
Peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:CBK90741.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_072_000G1_scaffold_226_26
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23513..23902
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35848.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
transcriptional regulator, ArsR family
L3_072_000G1_scaffold_226_27
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23929..24147
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H862_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35849.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_000G1_scaffold_226_28
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24157..26040
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35850.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
heavy metal translocating P-type ATPase
L3_072_000G1_scaffold_226_29
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26164..26397
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H976_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35851.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_072_000G1_scaffold_226_30
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26811..27704
DNA (894bp) protein (298aa)
EDD domain protein DegV family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCD4_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CDE35852.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
degV family protein
Displaying items 1-30 of 147 in total

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