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L3_072_000G1_scaffold_228

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_228_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(129..809)
DNA (681bp) protein (227aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Orotate phosphoribosyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA63_9ACTN
orotate phosphoribosyltransferase
L3_072_000G1_scaffold_228_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1244..4012
DNA (2769bp) protein (923aa)
magnesium-translocating P-type ATPase (EC:3.6.3.2)
Magnesium-importing ATPase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A2U5_9ACTN
Magnesium-importing ATPase {ECO:0000313|EMBL:CDA35467.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_072_000G1_scaffold_228_3
unknown

Not on your lists

comp(4182..4859)
DNA (678bp) protein (226aa)

This feature has no annotations

L3_072_000G1_scaffold_228_4
Eggerthella sp. CAG:368, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4895..5650)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BMZ0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD67176.1}; TaxID=1262877 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:368.;"
L3_072_000G1_scaffold_228_5
unknown

Not on your lists

comp(5725..7287)
DNA (1563bp) protein (521aa)

This feature has no annotations

L3_072_000G1_scaffold_228_6
Firmicutes bacterium CAG:791, Firmicutes, Bacteria

Not on your lists

comp(7305..7757)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:791 RepID=R5CE07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX66195.1}; TaxID=1262993 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:791.;"
L3_072_000G1_scaffold_228_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7901..9445)
DNA (1545bp) protein (515aa)
Transcriptional regulator, LuxR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED18_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74110.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_072_000G1_scaffold_228_8
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9708..11021)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G7Z4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA91620.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_072_000G1_scaffold_228_9
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11233..12660)
DNA (1428bp) protein (476aa)
protein-N(pi)-phosphohistidine--sugarphosphotran sferase (EC:2.7.1.69)
Phosphotransferase system, EIIC n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G7Z3_9ACTN
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EEA91619.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
L3_072_000G1_scaffold_228_10
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13151..14488
DNA (1338bp) protein (446aa)
Phospholipase/carboxylesterase {ECO:0000313|EMBL:EEA91618.1}; EC=3.1.-.- {ECO:0000313|EMBL:EEA91618.1};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Phospholipase/carboxylesterase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G7Z2_9ACTN
hypothetical protein
L3_072_000G1_scaffold_228_11
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14753..16264
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G7Z1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA91617.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_072_000G1_scaffold_228_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16591..17328
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGD5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35594.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_072_000G1_scaffold_228_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17353..18675
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7C9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35593.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_072_000G1_scaffold_228_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18724..19965
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED21_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38509.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_072_000G1_scaffold_228_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20046..20888
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9H5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74106.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_072_000G1_scaffold_228_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20998..21618)
DNA (621bp) protein (207aa)
Response regulator receiver domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED24_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74105.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
two-component response regulator
L3_072_000G1_scaffold_228_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21615..23108)
DNA (1494bp) protein (498aa)
two-component sensor histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED25_9ACTN
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EBA38513.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_072_000G1_scaffold_228_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23111..24994)
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED26_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38515.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_072_000G1_scaffold_228_19
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25258..26688)
DNA (1431bp) protein (477aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
Glycosyl hydrolase, family 1 n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAQ3_9ACTN
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EEA90579.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
L3_072_000G1_scaffold_228_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27033..27677)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZM77_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35401.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_072_000G1_scaffold_228_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27822..28310)
DNA (489bp) protein (163aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
quorum-sensing autoinducer 2 (AI-2), LuxS (EC:4.4.1.21)
S-ribosylhomocysteine lyase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED29_9ACTN
L3_072_000G1_scaffold_228_22
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28480..29970)
DNA (1491bp) protein (497aa)
glycerol kinase (EC:2.7.1.30)
Putative glycerol kinase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G7Y2_9ACTN
Putative glycerol kinase {ECO:0000313|EMBL:EEA91608.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
L3_072_000G1_scaffold_228_23
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30114..31055)
DNA (942bp) protein (314aa)
transketolase subunit B (EC:2.2.1.1)
Transketolase, C-terminal domain protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G7Y1_9ACTN
Transketolase, C-terminal domain protein {ECO:0000313|EMBL:EEA91607.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
L3_072_000G1_scaffold_228_24
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31048..31884)
DNA (837bp) protein (279aa)
transketolase subunit A (EC:2.2.1.1)
Transketolase, thiamine diphosphate binding domain protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G7Y0_9ACTN
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:EEA91606.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
L3_072_000G1_scaffold_228_25
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31887..33287)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G7X9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA91605.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_072_000G1_scaffold_228_26
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33569..33886)
DNA (318bp) protein (106aa)
putative PTS system, IIA component (EC:2.7.1.-)
UPI0002DE97C1 related cluster n=1 Tax=unknown RepID=UPI0002DE97C1
PTS system, Lactose/Cellobiose specific IIA subunit {ECO:0000313|EMBL:EEA89910.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
L3_072_000G1_scaffold_228_27
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33889..34191)
DNA (303bp) protein (101aa)
Phosphotransferase system lactose/cellobiose-specific IIB subunit n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N937_CORGP
PTS system lactose/cellobiose-specific transporter subunit IIB
Phosphotransferase system lactose/cellobiose-specific IIB subunit {ECO:0000313|EMBL:AEB07713.1}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
L3_072_000G1_scaffold_228_28
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34282..35535)
DNA (1254bp) protein (418aa)
Phosphotransferase system EIIC n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N938_CORGP
PTS system transporter subunit IIC
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
L3_072_000G1_scaffold_228_29
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35647..37269)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N939_CORGP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB07715.1}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
L3_072_000G1_scaffold_228_30
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(37299..38771)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N940_CORGP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB07716.1}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
Displaying items 1-30 of 57 in total

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