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L3_072_000G1_scaffold_236

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Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_236_1
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(274..1173)
DNA (900bp) protein (300aa)
Foldase protein PrsA {ECO:0000256|HAMAP-Rule:MF_01145}; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_01145};; Flags: Precursor;; TaxID=1256206 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp126.;"
Foldase protein PrsA n=4 Tax=Lactobacillus casei group RepID=S2LJE5_LACPA
Parvulin-like peptidyl-prolyl isomerase
L3_072_000G1_scaffold_236_2
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1463..7171
DNA (5709bp) protein (1903aa)
Subtilisin-like serine protease n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp17 RepID=S2M3T6_LACPA
Uncharacterized protein {ECO:0000313|EMBL:AGP69131.1}; TaxID=1318635 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei LOCK919.;"
Hypothetical protein
L3_072_000G1_scaffold_236_3
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7281..8213)
DNA (933bp) protein (311aa)
Catabolite control protein B n=27 Tax=Lactobacillus casei group RepID=B3W9Z8_LACCB
ccpB; catabolite control protein B
Catabolite control protein B {ECO:0000313|EMBL:EPC91726.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L3_072_000G1_scaffold_236_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8363..8776)
DNA (414bp) protein (138aa)
Uncharacterized protein n=29 Tax=Lactobacillus casei group RepID=C5F8Z4_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC86229.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_072_000G1_scaffold_236_5
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9054..11663
DNA (2610bp) protein (870aa)
Lysyl-tRNA synthetase (Class II) n=23 Tax=Lactobacillus casei group RepID=D8GB66_LACCZ
Lysyl-tRNA synthetase {ECO:0000313|EMBL:GAN35863.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
lysyl-tRNA synthetase
L3_072_000G1_scaffold_236_6
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11768..12364
DNA (597bp) protein (199aa)
16S RNA methylase n=8 Tax=Lactobacillus casei group RepID=C5F8Z2_LACPA
16S RNA G1207 methylase RsmC
Ribosomal RNA small subunit methyltransferase C {ECO:0000313|EMBL:AGP69127.1}; TaxID=1318635 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei LOCK919.;"
L3_072_000G1_scaffold_236_7
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12421..12750
DNA (330bp) protein (110aa)
Uncharacterized protein n=49 Tax=Lactobacillus casei group RepID=C5F8Z1_LACPA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC85994.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_072_000G1_scaffold_236_8
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12893..13399
DNA (507bp) protein (169aa)
tadA; tRNA-specific adenosine deaminase (EC:3.5.4.-)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
Nucleoside deaminase n=37 Tax=Lactobacillus casei group RepID=F2MA92_LACCC
L3_072_000G1_scaffold_236_9
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13748..15445
DNA (1698bp) protein (566aa)
DNA polymerase III, gamma/tau subunit n=19 Tax=Lactobacillus casei group RepID=Q035W5_LACC3
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:GAN41600.1}; TaxID=1435040 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 1981.;"
DNA polymerase III, subunit gamma/tau
L3_072_000G1_scaffold_236_10
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15462..15770
DNA (309bp) protein (103aa)
Nucleoid-associated protein LBPG_02181 n=38 Tax=Lactobacillus casei group RepID=C5F8Y8_LACPA
hypothetical protein
Nucleoid-associated protein LC0644_0457 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L3_072_000G1_scaffold_236_11
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16085..16684
DNA (600bp) protein (200aa)
Recombination protein RecR n=50 Tax=Lactobacillus casei group RepID=RECR_LACC3
recR; Recombination protein recR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L3_072_000G1_scaffold_236_12
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16684..16947
DNA (264bp) protein (88aa)
Uncharacterized protein n=51 Tax=Lactobacillus casei group RepID=F2MA88_LACCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC85998.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_072_000G1_scaffold_236_13
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17541..18185
DNA (645bp) protein (215aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
Thymidylate kinase n=4 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2LS63_LACPA
thymidylate kinase
L3_072_000G1_scaffold_236_14
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18220..18549
DNA (330bp) protein (110aa)
Uncharacterized protein n=56 Tax=Lactobacillus casei group RepID=C5F8Y4_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI68782.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L3_072_000G1_scaffold_236_15
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18549..19526
DNA (978bp) protein (326aa)
DNA polymerase III subunit delta n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp70 RepID=S2TYF0_LACPA
DNA polymerase III subunit gamma
DNA polymerase III subunit delta {ECO:0000313|EMBL:EPD07206.1}; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
L3_072_000G1_scaffold_236_16
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19531..19869
DNA (339bp) protein (113aa)
Initiation-control protein YabA n=54 Tax=Lactobacillus casei group RepID=YABA_LACC3
regulator of replication initiation timing
Initiation-control protein YabA {ECO:0000256|HAMAP-Rule:MF_01159, ECO:0000256|SAAS:SAAS00063209}; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
L3_072_000G1_scaffold_236_17
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19871..20728
DNA (858bp) protein (286aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1256211 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei CNCM I-4649.;"
Ribosomal RNA small subunit methyltransferase I n=30 Tax=Lactobacillus casei group RepID=B3W9Y4_LACCB
hypothetical protein
L3_072_000G1_scaffold_236_18
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20823..21566
DNA (744bp) protein (248aa)
Acyl-ACP thioesterase n=44 Tax=Lactobacillus casei group RepID=K0N709_LACCA
Acyl-ACP thioesterase
Acyl-ACP thioesterase {ECO:0000313|EMBL:EPC86004.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_072_000G1_scaffold_236_19
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21663..22643)
DNA (981bp) protein (327aa)
L-asparaginase n=15 Tax=Lactobacillus casei group RepID=C5F8X9_LACPA
l-asparaginase
L-asparaginase {ECO:0000313|EMBL:EPC86005.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_072_000G1_scaffold_236_20
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23127..23645
DNA (519bp) protein (173aa)
Folate transporter FolT n=48 Tax=Lactobacillus casei group RepID=FOLT_LACC3
Substrate-specific component FolT of folate ECF transporter
Folate ECF transporter substrate-specific component {ECO:0000313|EMBL:EKQ00805.1}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
L3_072_000G1_scaffold_236_21
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23877..24482
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Lactobacillus casei group RepID=K6R9L8_LACCA
Uncharacterized protein {ECO:0000313|EMBL:EKQ17421.1}; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
hypothetical protein
L3_072_000G1_scaffold_236_22
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25218..25940
DNA (723bp) protein (241aa)
Uncharacterized protein YdiC n=50 Tax=Lactobacillus casei group RepID=K0NBZ8_LACCA
Inactive metal-dependent protease, putative molecular chaperone
Glycoprotein endopeptidase {ECO:0000313|EMBL:EPC92360.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L3_072_000G1_scaffold_236_23
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25918..26457
DNA (540bp) protein (180aa)
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine N-acetyltransferase n=43 Tax=Lactobacillus casei group RepID=B3W9X8_LACCB
Alanine acetyltransferase {ECO:0000313|EMBL:ERN50702.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L3_072_000G1_scaffold_236_24
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


26491..27516
DNA (1026bp) protein (342aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1256230 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. tolerans Lpl7.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=36 Tax=Lactobacillus casei group RepID=TSAD_LACC3
Metalloendopeptidase, glycoprotease family
L3_072_000G1_scaffold_236_25
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27612..27947
DNA (336bp) protein (112aa)
Oligo-beta-mannoside-specific phosphotransferase enzyme IIB component n=51 Tax=Lactobacillus casei group RepID=K0MXC7_LACCA
PTS system, cellobiose-specific IIB component
PTS system protein {ECO:0000313|EMBL:EPC55227.1}; TaxID=1256201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp123.;"
L3_072_000G1_scaffold_236_26
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28224..30176)
DNA (1953bp) protein (651aa)
ABC transporter ATP-binding protein Uup n=14 Tax=Lactobacillus casei group RepID=C5F8X2_LACPA
ABC transporter ATP-binding protein uup
ABC transporter ATPase {ECO:0000313|EMBL:EPC53570.1}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
L3_072_000G1_scaffold_236_27
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30394..31047
DNA (654bp) protein (218aa)
Redox-sensing transcriptional repressor Rex n=54 Tax=Lactobacillus casei group RepID=K0NBZ5_LACCA
Redox-sensitive transcriptional regulator
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L3_072_000G1_scaffold_236_28
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31189..31554
DNA (366bp) protein (122aa)
HTH-type transcriptional repressor ytrA n=54 Tax=Lactobacillus casei group RepID=K0N703_LACCA
Transcriptional regulator, GntR family
GntR family transcriptional regulator {ECO:0000313|EMBL:EKQ09162.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
L3_072_000G1_scaffold_236_29
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31551..32438
DNA (888bp) protein (296aa)
ABC-type multidrug transport system, ATPase component n=20 Tax=Lactobacillus casei group RepID=B3W9X2_LACCB
ccmA; ABC transporter
ABC transporter-like protein {ECO:0000313|EMBL:EPC53573.1}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
L3_072_000G1_scaffold_236_30
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32439..33467
DNA (1029bp) protein (343aa)
Uncharacterized protein n=4 Tax=Lactobacillus casei group RepID=D8GB39_LACCZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAN41621.1}; TaxID=1435040 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 1981.;"
Displaying items 1-30 of 67 in total

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