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L3_072_000G1_scaffold_248

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_248_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..149)
DNA (147bp) protein (49aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S5J0_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB09529.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_072_000G1_scaffold_248_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(458..1453)
DNA (996bp) protein (332aa)
exopolyphosphatase-like protein (EC:3.6.1.40)
Exopolyphosphatase-like protein {ECO:0000313|EMBL:ADB09528.1}; EC=3.6.1.40 {ECO:0000313|EMBL:ADB09528.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Exopolyphosphatase-like protein n=2 Tax=Bifidobacterium dentium RepID=D2Q9P2_BIFDB
L3_072_000G1_scaffold_248_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1487..2065)
DNA (579bp) protein (193aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S5J2_9BIFI
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26827.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_072_000G1_scaffold_248_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2068..2628)
DNA (561bp) protein (187aa)
Septum formation initiator n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S5J3_9BIFI
Septum formation initiator {ECO:0000313|EMBL:EFM41716.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_072_000G1_scaffold_248_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2701..3999)
DNA (1299bp) protein (433aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
eno; enolase (EC:4.2.1.11)
Enolase n=2 Tax=Bifidobacterium dentium RepID=E0Q7K2_9BIFI
L3_072_000G1_scaffold_248_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4120..7641)
DNA (3522bp) protein (1174aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Transcription-repair-coupling factor n=2 Tax=Bifidobacterium dentium RepID=D2Q9N8_BIFDB
mfd; transcription-repair coupling factor
L3_072_000G1_scaffold_248_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7631..8230)
DNA (600bp) protein (200aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=2 Tax=Bifidobacterium dentium RepID=D2Q9N7_BIFDB
L3_072_000G1_scaffold_248_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8290..8802)
DNA (513bp) protein (171aa)
N-acetyl transferase (EC:2.3.1.183)
N-acetyl transferase n=4 Tax=Bifidobacterium dentium RepID=D2Q9N6_BIFDB
Acetyltransferase (GNAT) domain protein {ECO:0000313|EMBL:ETO97748.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_248_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8894..12118)
DNA (3225bp) protein (1075aa)
UPF0182 protein BDP_0866 n=2 Tax=Bifidobacterium dentium RepID=D2Q9N5_BIFDB
UPF0182 protein HMPREF1494_1588 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_072_000G1_scaffold_248_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12296..12505)
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q7K7_9BIFI
PF04328 family protein {ECO:0000313|EMBL:ETO97734.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_072_000G1_scaffold_248_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12505..14919)
DNA (2415bp) protein (805aa)
Carbon starvation protein CstA n=2 Tax=Bifidobacterium dentium RepID=E0Q7K8_9BIFI
Carbon starvation protein CstA {ECO:0000313|EMBL:ETO97867.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
carbon starvation protein A
L3_072_000G1_scaffold_248_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15150..15488)
DNA (339bp) protein (113aa)
Branched-chain amino acid transport protein AzlD n=2 Tax=Bifidobacterium dentium RepID=E0Q7K9_9BIFI
Branched-chain amino acid transport protein AzlD {ECO:0000313|EMBL:ETO97869.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
branched-chain amino acid permease
L3_072_000G1_scaffold_248_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15485..16255)
DNA (771bp) protein (257aa)
Branched-chain amino acid transport n=2 Tax=Bifidobacterium dentium RepID=D2Q9N1_BIFDB
branched-chain amino acid transport
Putative azaleucine resistance protein AzlC {ECO:0000313|EMBL:ETO97759.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_248_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16417..16932
DNA (516bp) protein (172aa)
NAD(P)H oxidoreductase (EC:1.6.5.2)
NAD(P)H oxidoreductase n=2 Tax=Bifidobacterium dentium RepID=D2Q9N0_BIFDB
Putative general stress protein 14 {ECO:0000313|EMBL:ETO97895.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_248_15
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17094..17678
DNA (585bp) protein (195aa)
maa; maltose O-acetyltransferase (EC:2.3.1.18)
Maa Maltose O-acetyltransferase n=2 Tax=Bifidobacterium dentium RepID=D2Q9M9_BIFDB
Transferase hexapeptide repeat protein {ECO:0000313|EMBL:ETO97856.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_248_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17720..18667)
DNA (948bp) protein (316aa)
Transcriptional regulator, LysR family n=4 Tax=Bifidobacterium dentium RepID=D2Q9M8_BIFDB
LysR substrate binding domain protein {ECO:0000313|EMBL:EFM41728.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
LysR family transcriptional regulator
L3_072_000G1_scaffold_248_17
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18767..19549
DNA (783bp) protein (261aa)
AroG2 3-deoxy-7-phosphoheptulonate synthase, Phe-sensitive n=2 Tax=Bifidobacterium dentium RepID=D2Q9M7_BIFDB
aroG2; 3-deoxy-7-phosphoheptulonate synthase
NAD(P)H-binding protein, PF13460 family {ECO:0000313|EMBL:ETO97794.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_248_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19719..20234
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S5K8_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26811.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
flavodoxin
L3_072_000G1_scaffold_248_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20245..20754)
DNA (510bp) protein (170aa)
DNA-binding domain, methylated-DNA-[protein]-cysteine S-methyltransferase family protein {ECO:0000313|EMBL:ETO97902.1}; EC=2.1.1.63 {ECO:0000313|EMBL:ETO97902.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ogt; O6-methylguanine-DNA methyltransferase (EC:3.1.21.7)
Ogt O6-methylguanine-DNA methyltransferase n=2 Tax=Bifidobacterium dentium RepID=D2Q9M5_BIFDB
L3_072_000G1_scaffold_248_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20956..21747
DNA (792bp) protein (264aa)
fabG; 3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.64)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S5L0_9BIFI
NAD(P)H-binding protein, PF13460 family {ECO:0000313|EMBL:ETO97900.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_248_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21962..22630
DNA (669bp) protein (223aa)
deaminase-reductase domain-containing protein (EC:1.1.1.193)
Riboflavin biosynthesis protein RibD C-terminal domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q7L9_9BIFI
Riboflavin biosynthesis protein RibD C-terminal domain protein {ECO:0000313|EMBL:EFM41734.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L3_072_000G1_scaffold_248_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22738..24309
DNA (1572bp) protein (524aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
zwf; Zwf Glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase n=2 Tax=Bifidobacterium dentium RepID=D2Q9M2_BIFDB
L3_072_000G1_scaffold_248_23
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24306..25265
DNA (960bp) protein (320aa)
Oxppcycle protein OpcA n=4 Tax=Bifidobacterium dentium RepID=D2Q9M1_BIFDB
opcA; Oxppcycle protein OpcA
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26805.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_072_000G1_scaffold_248_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25296..26087
DNA (792bp) protein (264aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31)
Pgl 6-phosphogluconolactonase {ECO:0000313|EMBL:ADB09506.1}; EC=3.1.1.31 {ECO:0000313|EMBL:ADB09506.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Pgl 6-phosphogluconolactonase n=2 Tax=Bifidobacterium dentium RepID=D2Q9M0_BIFDB
L3_072_000G1_scaffold_248_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26188..27636)
DNA (1449bp) protein (483aa)
gnt; 6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
6-phosphogluconate dehydrogenase, decarboxylating n=2 Tax=Bifidobacterium dentium RepID=D2Q9L9_BIFDB
L3_072_000G1_scaffold_248_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27744..28358)
DNA (615bp) protein (205aa)
peptidase E (EC:3.4.13.21)
Peptidase E {ECO:0000313|EMBL:ADB09504.1}; EC=3.4.13.21 {ECO:0000313|EMBL:ADB09504.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Peptidase E n=3 Tax=Bifidobacterium dentium RepID=D2Q9L8_BIFDB
L3_072_000G1_scaffold_248_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28475..31021)
DNA (2547bp) protein (849aa)
lysX; lysylcardiolipin synthase/Lysyltransferase (EC:6.1.1.6)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q7M5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41740.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L3_072_000G1_scaffold_248_28
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31050..32435)
DNA (1386bp) protein (462aa)
Putative uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=D2Q9L6_BIFDB
Putative esterase {ECO:0000313|EMBL:ETO97793.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_072_000G1_scaffold_248_29
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32807..33592
DNA (786bp) protein (262aa)
ABC transporter ATP-binding protein (EC:3.6.3.30)
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:ADB09500.1}; EC=3.6.3.30 {ECO:0000313|EMBL:ADB09500.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
ATP-binding protein of ABC transporter system n=2 Tax=Bifidobacterium dentium RepID=D2Q9L4_BIFDB
L3_072_000G1_scaffold_248_30
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33589..34377
DNA (789bp) protein (263aa)
TIGR00245 family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q7M9_9BIFI
TIGR00245 family protein {ECO:0000313|EMBL:EFM41744.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
Displaying items 1-30 of 62 in total

View Taxonomy