ggKbase home page

L3_072_000G1_scaffold_250

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_250_1
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

206..694
DNA (489bp) protein (163aa)
Dithiol-disulfide isomerase n=1 Tax=Lactobacillus gasseri K7 RepID=S1S9I6_9LACO
dithiol-disulfide isomerase
Dithiol-disulfide isomerase {ECO:0000313|EMBL:AJC07571.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_2
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(704..1588)
DNA (885bp) protein (295aa)
Competence protein n=1 Tax=Lactobacillus gasseri K7 RepID=S1SNJ0_9LACO
competence protein
Competence protein {ECO:0000313|EMBL:AJC07570.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_3
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1636..2289)
DNA (654bp) protein (218aa)
Negative regulator of genetic competence (MecA) n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V235_9LACO
adaptor protein
Adaptor protein {ECO:0000313|EMBL:AJC07569.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_4
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2393..2794)
DNA (402bp) protein (134aa)
Regulatory protein Spx n=2 Tax=Lactobacillus gasseri RepID=D7V234_9LACO
transcriptional regulator
Regulatory protein Spx {ECO:0000256|HAMAP-Rule:MF_01132}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_5
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2991..4730)
DNA (1740bp) protein (580aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Lactobacillus gasseri K7 RepID=S1S1G5_9LACO
phosphoenolpyruvate-protein phosphotransferase
L3_072_000G1_scaffold_250_6
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4730..4996)
DNA (267bp) protein (89aa)
Phosphotransferase system, HPr-related protein n=6 Tax=Lactobacillus gasseri RepID=Q041Z9_LACGA
phosphocarrier protein HPr
Phosphocarrier protein HPr {ECO:0000313|EMBL:AJC07566.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_7
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5116..5298)
DNA (183bp) protein (61aa)
Uncharacterized protein n=7 Tax=Lactobacillus gasseri RepID=C4VTB2_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFL98008.1}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
L3_072_000G1_scaffold_250_8
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5505..7673
DNA (2169bp) protein (723aa)
ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones n=1 Tax=Lactobacillus gasseri K7 RepID=S1RYZ9_9LACO
ATP-dependent Clp protease ClpE {ECO:0000313|EMBL:AJC07564.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
ATP-dependent Clp protease ClpE
L3_072_000G1_scaffold_250_9
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7801..8082
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V229_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAS08635.1}; TaxID=257314 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533).;"
L3_072_000G1_scaffold_250_10
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8151..9719)
DNA (1569bp) protein (523aa)
Peptide chain release factor 3 n=1 Tax=Lactobacillus gasseri K7 RepID=S1S1H0_9LACO
peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_11
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9719..10585)
DNA (867bp) protein (289aa)
Hemolysin-like protein n=1 Tax=Lactobacillus gasseri K7 RepID=S1S9J8_9LACO
hemolysin transporter protein
Hemolysin transporter protein {ECO:0000313|EMBL:AJC07562.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_12
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10700..11161
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Lactobacillus gasseri K7 RepID=S1SNJ7_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC07561.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_13
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11165..11662)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Lactobacillus gasseri K7 RepID=S1RZ01_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC07560.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_14
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11832..12224)
DNA (393bp) protein (131aa)
Uncharacterized protein n=2 Tax=Lactobacillus gasseri RepID=D7V224_9LACO
hypothetical protein
UPF0374 protein P906_02775 {ECO:0000256|HAMAP-Rule:MF_01568}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_15
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12261..13076)
DNA (816bp) protein (272aa)
Regulatory protein RecX n=1 Tax=Lactobacillus gasseri K7 RepID=S1S1H3_9LACO
recombination protein RecX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_16
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13205..14584
DNA (1380bp) protein (460aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=2 Tax=Lactobacillus gasseri RepID=D7V222_9LACO
RNA methyltransferase
RNA methyltransferase {ECO:0000313|EMBL:AJC07557.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_17
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14899..16062)
DNA (1164bp) protein (388aa)
Hydroxymethylglutaryl-CoA synthase n=1 Tax=Lactobacillus gasseri K7 RepID=S1SNK2_9LACO
hydroxymethylglutaryl-CoA synthase
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:AJC07556.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_18
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16063..17298)
DNA (1236bp) protein (412aa)
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.88 {ECO:0000256|RuleBase:RU361219};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Hydroxymethylglutaryl-CoA reductase n=1 Tax=Lactobacillus gasseri K7 RepID=S1RZ07_9LACO
hydroxymethylglutaryl-CoA reductase
L3_072_000G1_scaffold_250_19
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17276..18442)
DNA (1167bp) protein (389aa)
Acetyl-CoA acetyltransferase n=1 Tax=Lactobacillus gasseri K7 RepID=S1ST27_9LACO
3-ketoacyl-CoA thiolase
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:AJC07554.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_20
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18568..19512)
DNA (945bp) protein (315aa)
Alpha/beta fold family hydrolase n=1 Tax=Lactobacillus gasseri K7 RepID=S1S1H6_9LACO
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:AJC07553.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_21
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19588..19884
DNA (297bp) protein (99aa)
Uncharacterized protein n=2 Tax=Lactobacillus gasseri RepID=D7V217_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC07552.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_22
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19928..20740)
DNA (813bp) protein (271aa)
HAD superfamily hydrolase n=1 Tax=Lactobacillus gasseri K7 RepID=S1SNK6_9LACO
sugar phosphatase
Sugar phosphatase {ECO:0000313|EMBL:AJC07551.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_23
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20754..21923)
DNA (1170bp) protein (390aa)
Major facilitator superfamily permease n=1 Tax=Lactobacillus gasseri K7 RepID=S1RZ10_9LACO
MFS transporter permease
MFS transporter permease {ECO:0000313|EMBL:AJC07550.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_24
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22030..23367)
DNA (1338bp) protein (446aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Glutamine synthetase n=1 Tax=Lactobacillus gasseri K7 RepID=S1ST33_9LACO
glutamine synthetase
L3_072_000G1_scaffold_250_25
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23572..24492)
DNA (921bp) protein (307aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
tRNA dimethylallyltransferase n=1 Tax=Lactobacillus gasseri K7 RepID=S1S1I2_9LACO
tRNA delta(2)-isopentenylpyrophosphate transferase
L3_072_000G1_scaffold_250_26
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24635..24814
DNA (180bp) protein (60aa)
Uncharacterized protein n=3 Tax=Lactobacillus johnsonii RepID=Q74IF2_LACJO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAS09386.1}; TaxID=257314 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533).;"
L3_072_000G1_scaffold_250_27
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24860..25258)
DNA (399bp) protein (133aa)
Rhodanese-like protein n=2 Tax=Lactobacillus gasseri RepID=D7V211_9LACO
sulfurtransferase
Sulfurtransferase {ECO:0000313|EMBL:AJC07547.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_28
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25295..25525)
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Lactobacillus gasseri RepID=D7V210_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC07546.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_29
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25528..26214)
DNA (687bp) protein (229aa)
Peptidase, S54 family n=2 Tax=Lactobacillus gasseri RepID=D7V209_9LACO
membrane protein
Membrane protein {ECO:0000313|EMBL:AJC07545.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_000G1_scaffold_250_30
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26230..26787)
DNA (558bp) protein (186aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
5-formyltetrahydrofolate cyclo-ligase n=2 Tax=Lactobacillus gasseri RepID=D7V208_9LACO
5-formyltetrahydrofolate cyclo-ligase
Displaying items 1-30 of 77 in total

View Taxonomy