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L3_072_000G1_scaffold_261

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Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_261_1
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(140..1132)
DNA (993bp) protein (331aa)
CAAX amino terminal protease family n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SWA3_9CLOT
CAAX amino terminal protease family {ECO:0000313|EMBL:EKQ50363.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
abortive infection protein
L3_072_000G1_scaffold_261_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1323..4805)
DNA (3483bp) protein (1161aa)
cell wall anchor n=1 Tax=Clostridium botulinum RepID=UPI0003803895
putative cell wall anchor domain-containing protein
Iron transport-associated domain protein {ECO:0000313|EMBL:EES50897.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L3_072_000G1_scaffold_261_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4848..5309)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZD3_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL08108.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_072_000G1_scaffold_261_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5337..5720)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2UZD4_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES48889.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L3_072_000G1_scaffold_261_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5756..6058)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JE34_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97835.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L3_072_000G1_scaffold_261_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6154..7797)
DNA (1644bp) protein (548aa)
ABC transporter, permease/ATP-binding protein n=2 Tax=Clostridium butyricum RepID=B1QWH4_CLOBU
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EEP55946.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
putative ABC transporter ATP-binding protein
L3_072_000G1_scaffold_261_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7828..9621)
DNA (1794bp) protein (598aa)
Multidrug ABC transporter permease/ATP-binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACV9_CLOBU
Cysteine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHD15509.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ABC transporter, permease/ATP-binding protein
L3_072_000G1_scaffold_261_8

Not on your lists

comp(9934..12036)
DNA (2103bp) protein (701aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDN0_CLOBU
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ETJ16680.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
methyl-accepting chemotaxis protein
L3_072_000G1_scaffold_261_9
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12072..12803)
DNA (732bp) protein (244aa)
Transferase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G3D2_CLOPA
Transferase {ECO:0000313|EMBL:ETD70453.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hexapaptide repeat-containing transferase
L3_072_000G1_scaffold_261_10
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13216..13560)
DNA (345bp) protein (115aa)
Macrophage migration inhibitory factor n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MZZ2_CLOSA
macrophage migration inhibitory factor
Macrophage migration inhibitory factor {ECO:0000313|EMBL:AGX45246.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_000G1_scaffold_261_11
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13747..14340)
DNA (594bp) protein (198aa)
bar; phosphinothricin N-acetyltransferase (EC:2.3.1.183)
acyltransferase n=1 Tax=Clostridium arbusti RepID=UPI00028A2861
Sortase-like acyltransferase {ECO:0000313|EMBL:AGK95283.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L3_072_000G1_scaffold_261_12
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14346..15128)
DNA (783bp) protein (261aa)
Putative amidohydrolase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M0Y2_9CLOT
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:CDM67574.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_072_000G1_scaffold_261_13
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15538..16434
DNA (897bp) protein (299aa)
Putative transcriptional regulator n=1 Tax=Clostridium termitidis CT1112 RepID=S0FTT2_9CLOT
Putative transcriptional regulator {ECO:0000313|EMBL:EMS71908.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
putative transcriptional regulator
L3_072_000G1_scaffold_261_14
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

16523..16786
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JNA2_FUSVA
Uncharacterized protein {ECO:0000313|EMBL:EES62324.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
hypothetical protein
L3_072_000G1_scaffold_261_15
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16859..17740
DNA (882bp) protein (294aa)
DNA repair photolyase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CG64_9CLOT
DNA repair photolyase {ECO:0000313|EMBL:EOR26206.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
radical SAM superfamily protein
L3_072_000G1_scaffold_261_16
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18277..18951)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9P5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS72111.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
hypothetical protein
L3_072_000G1_scaffold_261_17
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19080..21044)
DNA (1965bp) protein (655aa)
Pullulanase {ECO:0000313|EMBL:KJZ89291.1}; EC=3.2.1.41 {ECO:0000313|EMBL:KJZ89291.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Pullulanase, type I n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z905_CLOBU
amyX; alpha-dextran endo-1,6-alpha-glucosidase
L3_072_000G1_scaffold_261_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21046..22998)
DNA (1953bp) protein (651aa)
Amylo-1,6-glucosidase n=2 Tax=Clostridium butyricum RepID=B1QSY1_CLOBU
Amylo-alpha-1,6-glucosidase {ECO:0000313|EMBL:EEP53675.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
glycogen debranching protein
L3_072_000G1_scaffold_261_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23017..24717)
DNA (1701bp) protein (567aa)
Bacterial extracellular solute-binding protein n=2 Tax=Clostridium butyricum RepID=B1QSY0_CLOBU
Peripheral protein {ECO:0000313|EMBL:KHD16557.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_072_000G1_scaffold_261_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24877..25722)
DNA (846bp) protein (282aa)
UPI0003D62DC7 related cluster n=1 Tax=unknown RepID=UPI0003D62DC7
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:ETI90682.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_072_000G1_scaffold_261_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25722..27155)
DNA (1434bp) protein (478aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
UPI0003D5AD3F related cluster n=1 Tax=unknown RepID=UPI0003D5AD3F
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:ETI90683.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L3_072_000G1_scaffold_261_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27190..28467)
DNA (1278bp) protein (426aa)
UPI0003D697A1 related cluster n=1 Tax=unknown RepID=UPI0003D697A1
Uncharacterized protein {ECO:0000313|EMBL:ETI90684.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_072_000G1_scaffold_261_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28695..30395)
DNA (1701bp) protein (567aa)
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
Putative sensor histidine kinase n=1 Tax=Clostridium butyricum 5521 RepID=B1QSX6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83715.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L3_072_000G1_scaffold_261_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30379..31917)
DNA (1539bp) protein (513aa)
UPI0003D5DBEF related cluster n=1 Tax=unknown RepID=UPI0003D5DBEF
Response regulator receiver protein {ECO:0000313|EMBL:ETI90686.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
two-component system response regulator YesN
L3_072_000G1_scaffold_261_25
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32115..33023)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7AKX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD61463.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_072_000G1_scaffold_261_26
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33272..34078)
DNA (807bp) protein (269aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPM3_CELLD
extradiol ring-cleavage dioxygenase class III protein subunit B
Extradiol ring-cleavage dioxygenase class III protein subunit B {ECO:0000313|EMBL:ADZ83683.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_072_000G1_scaffold_261_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34232..35626)
DNA (1395bp) protein (465aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=2 Tax=Clostridium butyricum RepID=B1QWI7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85703.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
RNA methyltransferase
L3_072_000G1_scaffold_261_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36043..37464)
DNA (1422bp) protein (474aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
pyk2; pyruvate kinase Pyk (EC:2.7.1.40)
Pyruvate kinase n=4 Tax=Clostridium butyricum RepID=B1QWI8_CLOBU
L3_072_000G1_scaffold_261_29
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37533..38492)
DNA (960bp) protein (320aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
pfkA; 6-phosphofructokinase PfkA (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SWD0_9CLOT
L3_072_000G1_scaffold_261_30
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39141..42725)
DNA (3585bp) protein (1195aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N7B5_9CLOT
Displaying items 1-30 of 55 in total

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