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L3_072_000G1_scaffold_281

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_281_1
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

281..601
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GQH4_SELRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL83011.1}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
L3_072_000G1_scaffold_281_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1288..2367)
DNA (1080bp) protein (360aa)
6-phosphofructokinase {ECO:0000256|SAAS:SAAS00197180}; EC=2.7.1.11 {ECO:0000256|SAAS:SAAS00197180};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E945_9ACTN
L3_072_000G1_scaffold_281_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2507..3592)
DNA (1086bp) protein (362aa)
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3K6_9ACTN
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase {ECO:0000313|EMBL:CDA35717.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Penicillin V acylase-like amidase
L3_072_000G1_scaffold_281_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3646..5139
DNA (1494bp) protein (498aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
M18 family aminopeptidase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMY9_9ACTN
aminopeptidase
L3_072_000G1_scaffold_281_5
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5354..5734
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHF6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX67004.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
RelB antitoxin
L3_072_000G1_scaffold_281_6
Coriobacteriaceae bacterium 68-1-3, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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5727..6218
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHF5_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC12666.1}; TaxID=1531429 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae.;" source="Coriobacteriaceae bacterium 68-1-3.;"
L3_072_000G1_scaffold_281_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6456..7391)
DNA (936bp) protein (312aa)
4-phosphoerythronate dehydrogenase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGM1_9ACTN
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:CDA35714.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
L3_072_000G1_scaffold_281_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7525..8412)
DNA (888bp) protein (296aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Methionine aminopeptidase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7P8_9ACTN
Map; methionine aminopeptidase
L3_072_000G1_scaffold_281_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8468..9244)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E950_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39795.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
radical SAM domain-containing protein
L3_072_000G1_scaffold_281_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9470..10267
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMY3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74557.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
alpha/beta hydrolase fold protein
L3_072_000G1_scaffold_281_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10479..12359
DNA (1881bp) protein (627aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E952_9ACTN
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EBA39797.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
conserved hypothetical protein
L3_072_000G1_scaffold_281_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12384..12740
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E953_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39798.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Hpt domain.
L3_072_000G1_scaffold_281_13
unknown

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12971..13531
DNA (561bp) protein (187aa)

This feature has no annotations

L3_072_000G1_scaffold_281_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13540..13869
DNA (330bp) protein (110aa)
ITIH5 Inter-alpha-trypsin inhibitor heavy chain H5 n=4 Tax=Bacteria RepID=E5XAR7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73922.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
putative XRE family transcriptional regulator
L3_072_000G1_scaffold_281_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14014..14775
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WFF7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73980.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
bacitracin transport ATP-binding protein BcrA
L3_072_000G1_scaffold_281_16
unknown

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14772..15596
DNA (825bp) protein (275aa)

This feature has no annotations

L3_072_000G1_scaffold_281_17
unknown

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15580..16398
DNA (819bp) protein (273aa)

This feature has no annotations

L3_072_000G1_scaffold_281_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16510..17319)
DNA (810bp) protein (270aa)
Peptidase C26 n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7P2_9ACTN
Peptidase C26 {ECO:0000313|EMBL:CDA35708.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
peptidase C26
L3_072_000G1_scaffold_281_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17407..18171)
DNA (765bp) protein (255aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E955_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA39800.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid ABC transporter ATP-binding protein
L3_072_000G1_scaffold_281_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18208..19041)
DNA (834bp) protein (278aa)
ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E956_9ACTN
ABC transporter, permease protein {ECO:0000313|EMBL:EBA39801.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid ABC transporter
L3_072_000G1_scaffold_281_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19038..19697)
DNA (660bp) protein (220aa)
ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E957_9ACTN
ABC transporter, permease protein {ECO:0000313|EMBL:EBA39802.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid ABC transporter
L3_072_000G1_scaffold_281_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19836..20831)
DNA (996bp) protein (332aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E958_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EBA39803.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid ABC transporter substrate-binding protein
L3_072_000G1_scaffold_281_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21328..23109)
DNA (1782bp) protein (594aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
Putative 1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7N6_9ACTN
L3_072_000G1_scaffold_281_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23338..23874
DNA (537bp) protein (179aa)
HD domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3J2_9ACTN
HD domain protein {ECO:0000313|EMBL:CDA35702.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
metal dependent phosphohydrolase
L3_072_000G1_scaffold_281_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24071..24898
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E961_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39806.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_072_000G1_scaffold_281_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25159..26016
DNA (858bp) protein (286aa)
HAD hydrolase family IIB n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7N1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74543.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
HAD-superfamily hydrolase
L3_072_000G1_scaffold_281_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26889..27599
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=R5ZMX1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35696.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
TetR family transcriptional regulator
L3_072_000G1_scaffold_281_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27611..32401
DNA (4791bp) protein (1597aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E976_9ACTN
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EBA39821.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
CoA-substrate-specific enzyme activase
L3_072_000G1_scaffold_281_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32898..33347
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E977_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39822.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_072_000G1_scaffold_281_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33473..34612)
DNA (1140bp) protein (380aa)
Hydrophobic domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E978_9ACTN
Hydrophobic domain protein {ECO:0000313|EMBL:EBA39824.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
Displaying items 1-30 of 57 in total

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