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L3_072_000G1_scaffold_286

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Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_286_1
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23..424
DNA (402bp) protein (134aa)
30S ribosomal protein S11 n=3 Tax=Clostridium RepID=D9QZN4_CLOSW
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
30S ribosomal protein S11
L3_072_000G1_scaffold_286_2
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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441..1034
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZN3_CLOSW
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
30S ribosomal protein S4
L3_072_000G1_scaffold_286_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1143..2111
DNA (969bp) protein (323aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WW51_9CLOT
DNA-directed RNA polymerase subunit alpha
L3_072_000G1_scaffold_286_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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2230..2766
DNA (537bp) protein (179aa)
50S ribosomal protein L17 n=2 Tax=Clostridium RepID=D3ACI6_9CLOT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
50S ribosomal protein L17
L3_072_000G1_scaffold_286_5
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2961..4205
DNA (1245bp) protein (415aa)
Putative cell wall binding repeat-containing protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZN0_CLOSW
Cell wall-binding protein {ECO:0000313|EMBL:KEZ89900.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
cell wall binding repeat-containing protein
L3_072_000G1_scaffold_286_6
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4227..5249
DNA (1023bp) protein (341aa)
Putative cell wall binding repeat-containing protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZM9_CLOSW
cell wall binding repeat-containing protein
Putative cell wall binding repeat-containing protein {ECO:0000313|EMBL:ADL06255.1}; Flags: Precursor;; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_286_7
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5426..6349
DNA (924bp) protein (308aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ABC transporter related protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZM8_CLOSW
ABC transporter
L3_072_000G1_scaffold_286_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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6339..7187
DNA (849bp) protein (283aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Cobalt ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=D3ACH8_9CLOT
ABC transporter
L3_072_000G1_scaffold_286_9
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7201..8001
DNA (801bp) protein (267aa)
Cobalt transport protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZM6_CLOSW
Transporter {ECO:0000313|EMBL:KEZ89896.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
cobalt transport protein
L3_072_000G1_scaffold_286_10
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8026..9051
DNA (1026bp) protein (342aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
tRNA pseudouridine synthase A n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZM5_CLOSW
tRNA pseudouridine synthase A
L3_072_000G1_scaffold_286_11
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9309..9743
DNA (435bp) protein (145aa)
50S ribosomal protein L13 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZM4_CLOSW
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
50S ribosomal protein L13
L3_072_000G1_scaffold_286_12
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9772..10164
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZM3_CLOSW
30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_286_13
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10963..11127)
DNA (165bp) protein (55aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BT00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58628.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
hypothetical protein
L3_072_000G1_scaffold_286_14
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11474..12982
DNA (1509bp) protein (503aa)
Ser/Thr phosphatase family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N5M6_9CLOT
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EJF42119.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
putative surface layer protein
L3_072_000G1_scaffold_286_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13108..14343
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JHF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75556.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_000G1_scaffold_286_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14712..15752
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5F4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44137.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Transglutaminase-like superfamily.
L3_072_000G1_scaffold_286_17
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15853..16443
DNA (591bp) protein (197aa)
lacA; galactoside O-acetyltransferase (EC:2.3.1.18)
Maltose O-acetyltransferase n=1 Tax=Clostridium sp. CAG:411 RepID=R7HQW4_9CLOT
Maltose O-acetyltransferase {ECO:0000313|EMBL:CDE42084.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
L3_072_000G1_scaffold_286_18
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16611..17243
DNA (633bp) protein (211aa)
Predicted ABC transporter, ATPase component n=2 Tax=Clostridium kluyveri RepID=A5N063_CLOK5
hypothetical protein
Predicted ABC transporter, ATPase component {ECO:0000313|EMBL:EDK34509.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680).;"
L3_072_000G1_scaffold_286_19
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17392..17952
DNA (561bp) protein (187aa)
Nitroreductase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LWY8_9CLOT
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AGF57730.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_072_000G1_scaffold_286_20
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18460..19671
DNA (1212bp) protein (404aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manganicus DSM 26584.;"
Tyrosine--tRNA ligase n=1 Tax=Lysinibacillus sphaericus OT4b.31 RepID=R7ZF55_LYSSH
tyrosyl-tRNA synthetase 2
L3_072_000G1_scaffold_286_21
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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19836..20849
DNA (1014bp) protein (338aa)
Transcriptional regulator, MerR family id=3814528 bin=GWF2_Clostridiales_36_10 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
transcriptional regulator, MerR family
Tax=GWF2_Clostridiales_36_10_curated
L3_072_000G1_scaffold_286_22
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20941..21402
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VN20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC95674.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_072_000G1_scaffold_286_23
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21440..22312
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JSM6_9FIRM
adenylyltransferase
Adenylyltransferase {ECO:0000313|EMBL:CDM69844.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_072_000G1_scaffold_286_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22436..23560
DNA (1125bp) protein (375aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MNA3_9FIRM
Methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:CBL35236.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_072_000G1_scaffold_286_25
Paenibacillus pini, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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23703..24692
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8ML85_ALKOO
Protein kinase {ECO:0000313|EMBL:GAF07704.1}; TaxID=1236976 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus pini JCM 16418.;"
hypothetical protein
L3_072_000G1_scaffold_286_26
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24933..25808
DNA (876bp) protein (292aa)
GCN5-related N-acetyltransferase n=2 Tax=Clostridium cellulovorans RepID=D9SV63_CLOC7
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADL53037.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_072_000G1_scaffold_286_27
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26443..27438
DNA (996bp) protein (332aa)
ABC transporter ATP-binding protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7B4_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EGN41556.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC transporter ATP-binding protein
L3_072_000G1_scaffold_286_28
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27425..28216
DNA (792bp) protein (264aa)
ABC transporter permease n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7B3_9FIRM
ABC transporter permease {ECO:0000313|EMBL:EGN41555.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC transporter permease
L3_072_000G1_scaffold_286_29
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28216..29013
DNA (798bp) protein (266aa)
ABC transporter permease n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7B2_9FIRM
ABC transporter permease {ECO:0000313|EMBL:EGN41554.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_072_000G1_scaffold_286_30
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29063..29974
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N4F2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB86701.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
serine/threonine protein kinase
Displaying items 1-30 of 65 in total

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