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L3_072_000G1_scaffold_294

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_294_1
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(181..1875)
DNA (1695bp) protein (565aa)
DNA repair protein RecN n=6 Tax=Lactobacillus fermentum RepID=B2GD61_LACF3
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=334390 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain NBRC 3956 / LMG 18251).;"
DNA repair protein RecN
L3_072_000G1_scaffold_294_2
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1893..2342)
DNA (450bp) protein (150aa)
Arginine repressor n=1 Tax=Lactobacillus fermentum NB-22 RepID=V4XKB9_LACFE
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
Arginine repressor
L3_072_000G1_scaffold_294_3
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2356..3171)
DNA (816bp) protein (272aa)
Hemolysin-like protein n=5 Tax=Lactobacillus fermentum RepID=R4RLJ2_LACFE
Hemolysin-like protein
Cell division protein FtsJ {ECO:0000313|EMBL:ESS00567.1}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
L3_072_000G1_scaffold_294_4
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3181..4056)
DNA (876bp) protein (292aa)
Geranyltranstransferase n=3 Tax=Lactobacillus fermentum RepID=B2GD64_LACF3
geranyltranstransferase
Geranyltranstransferase {ECO:0000313|EMBL:CDI69478.1}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
L3_072_000G1_scaffold_294_5
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4056..4349)
DNA (294bp) protein (98aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
Exodeoxyribonuclease 7 small subunit n=7 Tax=Lactobacillus fermentum RepID=EX7S_LACF3
Exodeoxyribonuclease 7 small subunit
L3_072_000G1_scaffold_294_6
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4349..5797)
DNA (1449bp) protein (483aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
Exodeoxyribonuclease 7 large subunit n=2 Tax=Lactobacillus fermentum RepID=R4RXS0_LACFE
Exodeoxyribonuclease 7 large subunit
L3_072_000G1_scaffold_294_7
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5798..6724)
DNA (927bp) protein (309aa)
Bifunctional protein FolD n=4 Tax=Lactobacillus fermentum RepID=FOLD_LACF3
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
L3_072_000G1_scaffold_294_8
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6833..7252)
DNA (420bp) protein (140aa)
N utilization substance protein B homolog n=3 Tax=Lactobacillus fermentum RepID=C0X087_LACFE
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
nusB; transcription antitermination protein NusB
L3_072_000G1_scaffold_294_9
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7252..7692)
DNA (441bp) protein (147aa)
Alkaline shock protein n=7 Tax=Lactobacillus fermentum RepID=R4RU03_LACFE
Alkaline shock protein
Alkaline shock protein {ECO:0000313|EMBL:ERJ51202.1}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L3_072_000G1_scaffold_294_10
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7783..8859)
DNA (1077bp) protein (359aa)
Creatinase n=1 Tax=Lactobacillus fermentum ATCC 14931 RepID=C0X085_LACFE
Xaa-Pro aminopeptidase
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:CDI69484.1}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
L3_072_000G1_scaffold_294_11
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(8945..9226)
DNA (282bp) protein (94aa)
50S ribosomal protein L27 n=6 Tax=Lactobacillus fermentum RepID=RL27_LACF3
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
L3_072_000G1_scaffold_294_12
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9250..9573)
DNA (324bp) protein (108aa)
Ribosomal protein n=7 Tax=Lactobacillus fermentum RepID=R4RIV9_LACFE
hypothetical protein
Ribosomal protein {ECO:0000313|EMBL:EQC59378.1}; TaxID=1366052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum MTCC 8711.;"
L3_072_000G1_scaffold_294_13
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(9586..9894)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RLK2_LACFE
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
L3_072_000G1_scaffold_294_14
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10058..10699)
DNA (642bp) protein (214aa)
Transcriptional regulator n=3 Tax=Lactobacillus fermentum RepID=B2GD74_LACF3
Transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:KJY08120.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
L3_072_000G1_scaffold_294_15
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11451..11984)
DNA (534bp) protein (178aa)
DUTPase n=5 Tax=Lactobacillus fermentum RepID=R4RXU3_LACFE
DUTPase
DUTPase {ECO:0000313|EMBL:AGL89278.1}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
L3_072_000G1_scaffold_294_16
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11977..12945)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DV53_LACFE
Uncharacterized protein {ECO:0000313|EMBL:KJY08122.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
hypothetical protein
L3_072_000G1_scaffold_294_17
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12938..13831)
DNA (894bp) protein (298aa)
Uncharacterized protein n=3 Tax=Lactobacillus fermentum RepID=D0DV52_LACFE
Uncharacterized protein {ECO:0000313|EMBL:CDI69491.1}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
hypothetical protein
L3_072_000G1_scaffold_294_18
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14099..14227
DNA (129bp) protein (43aa)
Uncharacterized protein n=5 Tax=Lactobacillus fermentum RepID=T0SL74_LACFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESS00714.1}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
L3_072_000G1_scaffold_294_19
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14401..15753)
DNA (1353bp) protein (451aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
Glutamine synthetase n=1 Tax=Lactobacillus fermentum ATCC 14931 RepID=C0X076_LACFE
Glutamine synthetase
L3_072_000G1_scaffold_294_20
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15952..16875)
DNA (924bp) protein (308aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
tRNA dimethylallyltransferase n=4 Tax=Lactobacillus fermentum RepID=C0X075_LACFE
miaA; tRNA Delta(2)-isopentenylpyrophosphate transferase
L3_072_000G1_scaffold_294_21
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16974..17150
DNA (177bp) protein (59aa)
Uncharacterized protein n=5 Tax=Lactobacillus fermentum RepID=R4RXU8_LACFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESS00711.1}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
L3_072_000G1_scaffold_294_22
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17326..17745)
DNA (420bp) protein (140aa)
Rhodanese domain-containing protein n=7 Tax=Lactobacillus fermentum RepID=R4RXT5_LACFE
Rhodanese domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:CDI69495.1}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
L3_072_000G1_scaffold_294_23
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17770..18732)
DNA (963bp) protein (321aa)
Glucokinase, ROK family n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RIW7_LACFE
Glucokinase, ROK family
Glucokinase, ROK family {ECO:0000313|EMBL:AGL89285.1}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
L3_072_000G1_scaffold_294_24
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18750..18986)
DNA (237bp) protein (79aa)
Uncharacterized protein n=7 Tax=Lactobacillus fermentum RepID=R4RLL2_LACFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGP68637.1}; TaxID=1582 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei.;"
L3_072_000G1_scaffold_294_25
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18983..19594)
DNA (612bp) protein (204aa)
Peptidase, S54 family n=3 Tax=Lactobacillus fermentum RepID=D0DV45_LACFE
Transporter {ECO:0000313|EMBL:KGP68636.1}; TaxID=1582 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei.;"
hypothetical protein
L3_072_000G1_scaffold_294_26
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19651..20205)
DNA (555bp) protein (185aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=575599 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
5-formyltetrahydrofolate cyclo-ligase n=4 Tax=Lactobacillus fermentum RepID=R4RXV2_LACFE
5-formyltetrahydrofolate cyclo-ligase
L3_072_000G1_scaffold_294_27
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(20428..20577)
DNA (150bp) protein (50aa)
50S ribosomal protein L33 2 n=6 Tax=Lactobacillus fermentum RepID=RL332_LACF3
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1366052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum MTCC 8711.;"
L3_072_000G1_scaffold_294_28
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20720..22804)
DNA (2085bp) protein (695aa)
Penicillin binding protein n=1 Tax=Lactobacillus fermentum (strain CECT 5716) RepID=D8IIE1_LACFC
Penicillin binding protein 2B {ECO:0000313|EMBL:CDI69500.1}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
penicillin binding protein
L3_072_000G1_scaffold_294_29
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23007..25634
DNA (2628bp) protein (876aa)
Bacterial membrane protein YfhO n=1 Tax=Lactobacillus fermentum ATCC 14931 RepID=C0X066_LACFE
Bacterial membrane protein YfhO {ECO:0000313|EMBL:EEI21389.1}; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
hypothetical protein
L3_072_000G1_scaffold_294_30
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25686..26162)
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=8 Tax=Lactobacillus fermentum RepID=GREA_LACF3
Transcription elongation factor greA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
Displaying items 1-30 of 73 in total

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