ggKbase home page

L3_072_000G1_scaffold_396

Search features with annotation key words

Displaying items 1-30 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_396_1
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..687
DNA (687bp) protein (229aa)
Amino acid/peptide transporter n=5 Tax=Bacteroides RepID=D2EUM8_9BACE
H+ symporter family protein {ECO:0000313|EMBL:KDS57273.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
amino acid/peptide transporter
L3_072_000G1_scaffold_396_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

729..1265
DNA (537bp) protein (179aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EDO52663.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EDO52663.1};; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=3 Tax=Bacteroides RepID=A7V793_BACUN
L3_072_000G1_scaffold_396_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1308..1880
DNA (573bp) protein (191aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=7 Tax=Bacteroides RepID=A7V794_BACUN
L3_072_000G1_scaffold_396_4
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1895..3076
DNA (1182bp) protein (394aa)
GTPase Obg n=4 Tax=Bacteroides RepID=A7V795_BACUN
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
GTP-binding protein Obg/CgtA
L3_072_000G1_scaffold_396_5
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3073..3900
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=D2EUQ2_9BACE
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_072_000G1_scaffold_396_6
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3900..4565
DNA (666bp) protein (222aa)
B3/4 domain protein n=4 Tax=Bacteroides RepID=A7V797_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS10049.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L3_072_000G1_scaffold_396_7
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4566..5285
DNA (720bp) protein (240aa)
Peptidase, M23 family n=7 Tax=root RepID=A7V798_BACUN
Peptidase, M23 family {ECO:0000313|EMBL:EFA21681.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
peptidase M23
L3_072_000G1_scaffold_396_8
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5295..6296
DNA (1002bp) protein (334aa)
PhoH family protein n=4 Tax=Bacteroides RepID=A7V799_BACUN
PhoH family protein {ECO:0000313|EMBL:EDO52669.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
PhoH family protein
L3_072_000G1_scaffold_396_9
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6324..7265
DNA (942bp) protein (314aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=2 Tax=Bacteroides RepID=A7V7A0_BACUN
L3_072_000G1_scaffold_396_10
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7266..8003
DNA (738bp) protein (246aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
demethylmenaquinone methyltransferase (EC:2.1.1.-)
Demethylmenaquinone methyltransferase n=3 Tax=Bacteroides RepID=A7V7A1_BACUN
L3_072_000G1_scaffold_396_11
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8035..8589
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I1F8_BACUN
Uncharacterized protein {ECO:0000313|EMBL:KDS57283.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L3_072_000G1_scaffold_396_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8638..9384
DNA (747bp) protein (249aa)
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate 5-dehydrogenase n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7ECS3_9BACE
Shikimate dehydrogenase substrate binding domain protein {ECO:0000313|EMBL:KDS57284.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
L3_072_000G1_scaffold_396_13
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9384..9599
DNA (216bp) protein (72aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A7V7A4_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO52674.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L3_072_000G1_scaffold_396_14
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9610..10275
DNA (666bp) protein (222aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A7V7A4_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV24733.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_072_000G1_scaffold_396_15
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10316..11224
DNA (909bp) protein (303aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A7V7A5_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFA21688.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_072_000G1_scaffold_396_16
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11396..11977
DNA (582bp) protein (194aa)
LemA family protein n=7 Tax=Bacteroides RepID=A7V7A6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY73136.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
LemA family protein
L3_072_000G1_scaffold_396_17
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12090..13259
DNA (1170bp) protein (390aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Uncharacterized protein n=7 Tax=Bacteroides RepID=D2EUR3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY73135.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L3_072_000G1_scaffold_396_18
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13264..14376
DNA (1113bp) protein (371aa)
Peptide chain release factor 1 n=2 Tax=Bacteroides uniformis RepID=I9IIG0_BACUN
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
bacterial peptide chain release factor 1 (bRF-1)
L3_072_000G1_scaffold_396_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14411..15241
DNA (831bp) protein (277aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
Orotidine 5'-phosphate decarboxylase n=3 Tax=Bacteroides uniformis RepID=I8ZID3_BACUN
orotidine 5'-phosphate decarboxylase
L3_072_000G1_scaffold_396_20
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15248..16474
DNA (1227bp) protein (409aa)
HD domain protein n=6 Tax=Bacteroides RepID=D2EUR6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY73132.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
metal dependent phosphohydrolase
L3_072_000G1_scaffold_396_21
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16559..17599
DNA (1041bp) protein (347aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase (EC:2.3.1.-)
UDP-3-O-acylglucosamine N-acyltransferase n=5 Tax=Bacteroides RepID=A7V7B1_BACUN
L3_072_000G1_scaffold_396_22
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17603..18988
DNA (1386bp) protein (462aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ n=7 Tax=Bacteroides RepID=A7V7B2_BACUN
3-hydroxyacyl-ACP dehydratase
L3_072_000G1_scaffold_396_23
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19126..19902
DNA (777bp) protein (259aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase n=6 Tax=Bacteroides RepID=A7V7B3_BACUN
L3_072_000G1_scaffold_396_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19951..20505
DNA (555bp) protein (185aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7V7B4_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY73128.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L3_072_000G1_scaffold_396_25
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20822..21427
DNA (606bp) protein (202aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
miaA; putative tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=7 Tax=Bacteroides RepID=A7V7B5_BACUN
L3_072_000G1_scaffold_396_26
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21403..22641)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=D2EUS2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV24745.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_072_000G1_scaffold_396_27
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22743..23492)
DNA (750bp) protein (250aa)
AhpC/TSA family protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VEJ2_9BACE
AhpC/TSA family protein {ECO:0000313|EMBL:EFV24746.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
alkyl hydroperoxide reductase
L3_072_000G1_scaffold_396_28
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23526..25607)
DNA (2082bp) protein (694aa)
TonB-dependent receptor n=2 Tax=Bacteroides RepID=A7V7F3_BACUN
TonB family domain-containing protein {ECO:0000313|EMBL:EFV24747.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
outer membrane transport energization protein TonB
L3_072_000G1_scaffold_396_29
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25651..27516)
DNA (1866bp) protein (622aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7ECV2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE00540.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
Thiol-disulfide isomerase and thioredoxins
L3_072_000G1_scaffold_396_30
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27546..27908)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EDW1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY73122.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
Predicted transcriptional regulator
Displaying items 1-30 of 130 in total

View Taxonomy