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L3_072_000G1_scaffold_400

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_400_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(198..2285)
DNA (2088bp) protein (696aa)
Peptidase family M3 {ECO:0000313|EMBL:EDM21686.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDM21686.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Peptidase family M3 n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZAZ7_9BACE
peptidyl-dipeptidase
L3_072_000G1_scaffold_400_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2314..3420)
DNA (1107bp) protein (369aa)
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=Bacteroides caccae RepID=A5ZB39_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19102.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Exonuclease III
L3_072_000G1_scaffold_400_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3404..4309)
DNA (906bp) protein (302aa)
Peptidase, S54 family n=2 Tax=Bacteroides caccae RepID=A5ZB40_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19101.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
L3_072_000G1_scaffold_400_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4290..4970)
DNA (681bp) protein (227aa)
Peptidase, S54 family {ECO:0000313|EMBL:EDM21689.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDM21689.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Peptidase, S54 family n=2 Tax=Bacteroides caccae RepID=A5ZB41_9BACE
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
L3_072_000G1_scaffold_400_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5189..5461
DNA (273bp) protein (91aa)
DNA-binding protein HU n=3 Tax=Bacteroides RepID=A5ZB42_9BACE
DNA-binding protein HU {ECO:0000313|EMBL:EDM21690.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
bacterial nucleoid protein Hbs
L3_072_000G1_scaffold_400_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


5546..7363
DNA (1818bp) protein (606aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=3 Tax=Bacteroides RepID=A5ZB43_9BACE
L3_072_000G1_scaffold_400_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7592..9601)
DNA (2010bp) protein (670aa)
Conserved domain protein n=3 Tax=root RepID=A5ZB44_9BACE
Conserved domain protein {ECO:0000313|EMBL:EDM21692.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000G1_scaffold_400_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9670..12015)
DNA (2346bp) protein (782aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=2 Tax=Bacteroides caccae RepID=A5ZB45_9BACE
L3_072_000G1_scaffold_400_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12359..12454
DNA (96bp) protein (32aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PRK5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73642.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_072_000G1_scaffold_400_10
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12751..13302
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U6C9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73643.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000G1_scaffold_400_11
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13457..14737)
DNA (1281bp) protein (427aa)
chitinase n=1 Tax=Bacteroides faecis RepID=UPI000262F92E
Uncharacterized protein {ECO:0000313|EMBL:CDE79968.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
chitinase
L3_072_000G1_scaffold_400_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14764..16203)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A054_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY80752.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_072_000G1_scaffold_400_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16250..17725)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UF20_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY80753.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_072_000G1_scaffold_400_14
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17770..19455)
DNA (1686bp) protein (562aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00036A5558
SusD family protein {ECO:0000313|EMBL:ERI86399.1}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes F0041.;"
hypothetical protein
L3_072_000G1_scaffold_400_15
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19477..22263)
DNA (2787bp) protein (929aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IJM3_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EES69505.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L3_072_000G1_scaffold_400_16
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22296..24047)
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IJM4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES69506.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L3_072_000G1_scaffold_400_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24061..27240)
DNA (3180bp) protein (1060aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A059_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY80757.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_072_000G1_scaffold_400_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27395..28852)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=K1G3T3_BACFG
Sulfatase {ECO:0000313|EMBL:KER49887.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
putative sulfatase
L3_072_000G1_scaffold_400_19
Bacteroides fragilis CAG:558, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29067..33182
DNA (4116bp) protein (1372aa)
Two-component system sensor histidine kinase/response regulator n=1 Tax=Bacteroides fragilis CAG:558 RepID=R5RSW9_9BACE
Two-component system sensor histidine kinase/response regulator {ECO:0000313|EMBL:CCZ37886.1}; TaxID=1263047 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:558.;"
putative two-component system sensor histidine kinase/response regulator fusion protein
L3_072_000G1_scaffold_400_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33282..35006)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZB32_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19006.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000G1_scaffold_400_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35029..38046)
DNA (3018bp) protein (1006aa)
Tetratricopeptide repeat protein n=2 Tax=Bacteroides caccae RepID=A5ZB33_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19005.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000G1_scaffold_400_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38179..38700)
DNA (522bp) protein (174aa)
Hydrolase, NUDIX family n=3 Tax=Bacteroides RepID=A5ZB34_9BACE
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDM21705.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ADP-ribose pyrophosphatase
L3_072_000G1_scaffold_400_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38834..40303)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZB36_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19003.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000G1_scaffold_400_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40337..41923)
DNA (1587bp) protein (529aa)
Glycosyl hydrolase, family 31 n=2 Tax=Bacteroides caccae RepID=A5ZB37_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19002.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
glycoside hydrolase
L3_072_000G1_scaffold_400_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41943..46073)
DNA (4131bp) protein (1377aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bacteroides caccae RepID=A5ZB38_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19001.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
histidine kinase
L3_072_000G1_scaffold_400_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46092..47195)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZAY6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19000.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative lipoprotein
L3_072_000G1_scaffold_400_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47226..49019)
DNA (1794bp) protein (598aa)
SusD family protein n=2 Tax=Bacteroides caccae RepID=A5ZAY7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18999.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
SusD family protein
L3_072_000G1_scaffold_400_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(49038..52073)
DNA (3036bp) protein (1012aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides caccae RepID=A5ZAY8_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDM21712.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
TonB-linked outer membrane protein SusC/RagA family
L3_072_000G1_scaffold_400_29
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

53007..53120
DNA (114bp) protein (38aa)
Alkyl hydroperoxide reductase C22 protein n=6 Tax=Bacteroides RepID=Q8A3Z2_BACTN
alkyl hydroperoxide reductase
Peroxiredoxin {ECO:0000313|EMBL:EOR99329.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
Displaying 29 items

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