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L3_072_000G1_scaffold_405

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_405_1
unknown

Not on your lists

comp(2..76)
DNA (75bp) protein (25aa)

This feature has no annotations

L3_072_000G1_scaffold_405_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(319..858)
DNA (540bp) protein (180aa)
Lysine decarboxylase n=2 Tax=Bifidobacterium dentium RepID=D2QAV2_BIFDB
TIGR00730 family protein {ECO:0000313|EMBL:ETO96329.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
lysine decarboxylase
L3_072_000G1_scaffold_405_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(937..1761)
DNA (825bp) protein (275aa)
Cobalt transport protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Y3_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27258.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
ABC transporter permease
L3_072_000G1_scaffold_405_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1758..3251)
DNA (1494bp) protein (498aa)
Cobalt ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFM42056.1}; EC=3.6.3.- {ECO:0000313|EMBL:EFM42056.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ABC transporter ATP-binding protein (EC:3.6.3.17)
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5Y2_9BIFI
L3_072_000G1_scaffold_405_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3356..3967)
DNA (612bp) protein (204aa)
Permease protein of ABC transporter system n=4 Tax=Bifidobacterium dentium RepID=D2QAV5_BIFDB
ABC transporter permease
Permease protein of ABC transporter system {ECO:0000313|EMBL:ADB09941.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_072_000G1_scaffold_405_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4136..5260)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Y0_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27261.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
mrp; mrp ATP-binding Mrp-like protein
L3_072_000G1_scaffold_405_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5346..8039)
DNA (2694bp) protein (898aa)
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
DNA ligase n=2 Tax=Bifidobacterium dentium RepID=D2QAV7_BIFDB
L3_072_000G1_scaffold_405_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8055..11453)
DNA (3399bp) protein (1133aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5X8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42052.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_072_000G1_scaffold_405_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11567..13699
DNA (2133bp) protein (711aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S992_9BIFI
Narrowly conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ADB09945.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
hypothetical protein
L3_072_000G1_scaffold_405_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13849..15510
DNA (1662bp) protein (554aa)
Arylsulfate sulfotransferase n=2 Tax=Bifidobacterium dentium RepID=D2QAW0_BIFDB
Arylsulfotransferase {ECO:0000313|EMBL:ETO96128.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
arylsulfate sulfotransferase
L3_072_000G1_scaffold_405_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15557..16408
DNA (852bp) protein (284aa)
ABC transporter ATP-binding protein (EC:3.6.3.20)
ATP-binding protein of ABC transporter system n=2 Tax=Bifidobacterium dentium RepID=D2QAW1_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27266.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_072_000G1_scaffold_405_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16415..17581)
DNA (1167bp) protein (389aa)
aminotransferase (EC:4.4.1.14)
Aminotransferase, class I/II n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S918_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27267.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_072_000G1_scaffold_405_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17660..18427)
DNA (768bp) protein (256aa)
polyphosphate glucokinase/transcriptional regulator (EC:2.7.1.4)
ROK family protein {ECO:0000313|EMBL:EFM42047.1}; EC=2.7.1.63 {ECO:0000313|EMBL:EFM42047.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Polyphosphate glucokinase/Transcriptional regulator n=4 Tax=Bifidobacterium dentium RepID=D2QAW3_BIFDB
L3_072_000G1_scaffold_405_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18828..19430
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5X2_9BIFI
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_072_000G1_scaffold_405_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19430..21733
DNA (2304bp) protein (768aa)
ABC transporter ATP-binding protein (EC:3.6.3.17)
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:ADB09951.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ADB09951.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
ATP-binding protein of ABC transporter system n=2 Tax=Bifidobacterium dentium RepID=D2QAW5_BIFDB
L3_072_000G1_scaffold_405_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21776..22927
DNA (1152bp) protein (384aa)
prolidase (X-Pro dipeptidase) (EC:3.5.2.7)
Amidohydrolase family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5X0_9BIFI
Amidohydrolase family protein {ECO:0000313|EMBL:ETO96322.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_405_17
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23034..23339
DNA (306bp) protein (102aa)
Hypothetical RNA binding protein n=4 Tax=Bifidobacterium dentium RepID=D2QAW7_BIFDB
hypothetical protein
RNA-binding protein, YhbY family {ECO:0000313|EMBL:ETO96140.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_405_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23480..24229)
DNA (750bp) protein (250aa)
tenA; transcriptional activator tenA (EC:2.5.1.3)
Transcriptional activator tenA n=2 Tax=Bifidobacterium dentium RepID=D2QAW8_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27273.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_072_000G1_scaffold_405_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24417..28268)
DNA (3852bp) protein (1284aa)
SNF2 family N-terminal domain protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S911_9BIFI
SNF2 family N-terminal domain protein {ECO:0000313|EMBL:EFM42041.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
helicase
L3_072_000G1_scaffold_405_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28291..29853)
DNA (1563bp) protein (521aa)
aminopeptidase C (EC:3.4.22.40)
Peptidase C1-like family n=2 Tax=Bifidobacterium dentium RepID=E1N8D3_9BIFI
Putative aminopeptidase C {ECO:0000313|EMBL:ETO96364.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_405_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29890..30726)
DNA (837bp) protein (279aa)
MazG family protein n=2 Tax=Bifidobacterium dentium RepID=B1S909_9BIFI
magZ; MazG-like conserved hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27276.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_072_000G1_scaffold_405_22
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30780..31778
DNA (999bp) protein (333aa)
Conserved hypothetical secreted protein n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2QAX2_BIFDB
PF07510 family protein {ECO:0000313|EMBL:ETO96216.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_072_000G1_scaffold_405_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31842..32582)
DNA (741bp) protein (247aa)
Potassium channel protein n=2 Tax=Bifidobacterium dentium RepID=D2QAX3_BIFDB
Potassium channel protein
Transporter, cation channel family protein {ECO:0000313|EMBL:ETO96350.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_405_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32672..34057)
DNA (1386bp) protein (462aa)
Na+ driven multidrug efflux pump n=2 Tax=Bifidobacterium dentium RepID=D2QAX4_BIFDB
Na+ driven multidrug efflux pump
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27279.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_072_000G1_scaffold_405_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34239..35231)
DNA (993bp) protein (331aa)
serA2; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.290)
SerA2 D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ADB09961.1}; EC=1.1.1.290 {ECO:0000313|EMBL:ADB09961.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
SerA2 D-3-phosphoglycerate dehydrogenase n=2 Tax=Bifidobacterium dentium RepID=D2QAX5_BIFDB
L3_072_000G1_scaffold_405_26
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35365..35748
DNA (384bp) protein (128aa)
Uncharacterized protein n=3 Tax=Bifidobacterium dentium RepID=E1N8E0_9BIFI
PF04343 family protein {ECO:0000313|EMBL:ETO96146.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_072_000G1_scaffold_405_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35772..36242)
DNA (471bp) protein (157aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Bifidobacterium dentium RepID=E0Q5V8_9BIFI
D-tyrosyl-tRNA(Tyr) deacylase
L3_072_000G1_scaffold_405_28
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36369..37175)
DNA (807bp) protein (269aa)
fabG; 3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.268)
FabG 3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:ADB09966.1}; EC=1.1.1.268 {ECO:0000313|EMBL:ADB09966.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
FabG 3-oxoacyl-[acyl-carrier protein] reductase n=4 Tax=Bifidobacterium dentium RepID=D2QAY0_BIFDB
L3_072_000G1_scaffold_405_29
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37266..38708)
DNA (1443bp) protein (481aa)
Amino acid permease n=2 Tax=Bifidobacterium dentium RepID=D2QAY1_BIFDB
Amino acid permease {ECO:0000313|EMBL:ETO96218.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
amino acid permease
L3_072_000G1_scaffold_405_30
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38934..39881)
DNA (948bp) protein (316aa)
GroES-like protein {ECO:0000313|EMBL:EFM42027.1}; EC=1.1.1.- {ECO:0000313|EMBL:EFM42027.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Alcohol dehydrogenase, catalytic domain protein, GroES-like family n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AUX8_BIFLN
alcohol dehydrogenase
Displaying items 1-30 of 45 in total

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