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L3_072_000G1_scaffold_417

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_417_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(238..2001)
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAM4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75059.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_072_000G1_scaffold_417_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2296..3096
DNA (801bp) protein (267aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Collinsella RepID=A4EAM5_9ACTN
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EBA39192.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_072_000G1_scaffold_417_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3526..4665
DNA (1140bp) protein (380aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGA0_9ACTN
L3_072_000G1_scaffold_417_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4876..5634
DNA (759bp) protein (253aa)
TIGR00730 family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAN1_9ACTN
TIGR00730 family protein {ECO:0000313|EMBL:EBA39198.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_072_000G1_scaffold_417_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5748..6047
DNA (300bp) protein (100aa)
Addiction module antitoxin RelB/DinJ family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZML3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75137.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
RelB antitoxin
L3_072_000G1_scaffold_417_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6050..6358
DNA (309bp) protein (103aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAN3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75136.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
relE; addiction module toxin, RelE/StbE
L3_072_000G1_scaffold_417_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6452..7312)
DNA (861bp) protein (287aa)
EDD domain protein DegV family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZP04_9ACTN
EDD domain protein DegV family {ECO:0000313|EMBL:CDA36096.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
degV; DegV family protein
L3_072_000G1_scaffold_417_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7469..8131
DNA (663bp) protein (221aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAN5_9ACTN
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:EBA39202.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
HAD-superfamily hydrolase
L3_072_000G1_scaffold_417_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8187..9623
DNA (1437bp) protein (479aa)
Dipeptidase PepV n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAN6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75133.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
dipeptidase
L3_072_000G1_scaffold_417_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9917..10858
DNA (942bp) protein (314aa)
Phosphate binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAN9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75132.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
phosphate binding protein
L3_072_000G1_scaffold_417_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10884..11792
DNA (909bp) protein (303aa)
Phosphate ABC transporter, permease protein PstC n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAP0_9ACTN
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:EBA39207.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
pstC; phosphate ABC transporter
L3_072_000G1_scaffold_417_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11785..12711
DNA (927bp) protein (309aa)
Phosphate ABC transporter permease protein PstA n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHS7_9ACTN
Phosphate ABC transporter permease protein PstA {ECO:0000313|EMBL:CDA36104.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
phosphate ABC transporter permease
L3_072_000G1_scaffold_417_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12708..13580
DNA (873bp) protein (291aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
pstB; Phosphate import ATP-binding protein PstB (EC:3.6.3.27)
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAP2_9ACTN
L3_072_000G1_scaffold_417_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13782..15641
DNA (1860bp) protein (620aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAP3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75128.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L3_072_000G1_scaffold_417_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15648..16418
DNA (771bp) protein (257aa)
Cof-like hydrolase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAP4_9ACTN
Cof-like hydrolase {ECO:0000313|EMBL:EBA39211.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
cof family hydrolase
L3_072_000G1_scaffold_417_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16606..16995
DNA (390bp) protein (130aa)
Iron dependent repressor DNA binding domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8V1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75126.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_072_000G1_scaffold_417_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17278..19230)
DNA (1953bp) protein (651aa)
Cadmium-exporting ATPase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAP6_9ACTN
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:KGI75125.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ZntA; cation transport ATPase
L3_072_000G1_scaffold_417_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19331..19549)
DNA (219bp) protein (73aa)
Heavy metal-associated domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB97_9ACTN
Heavy metal-associated domain protein {ECO:0000313|EMBL:CDA36110.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
heavy metal transport/detoxification protein
L3_072_000G1_scaffold_417_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19612..19977)
DNA (366bp) protein (122aa)
Transcriptional regulator, ArsR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAP8_9ACTN
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EBA39215.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
transcriptional regulator, ArsR family
L3_072_000G1_scaffold_417_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20367..21575)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAP9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39216.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_072_000G1_scaffold_417_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22127..23095)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAQ1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75159.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
DNA polymerase III epsilon subunit-like 3'-5' exonuclease
L3_072_000G1_scaffold_417_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23268..24356
DNA (1089bp) protein (363aa)
Conserved domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAQ2_9ACTN
Conserved domain protein {ECO:0000313|EMBL:EBA39219.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Protein of unknown function (DUF2899).
L3_072_000G1_scaffold_417_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24490..24972)
DNA (483bp) protein (161aa)
UPF0178 protein COLAER_01511 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAQ3_9ACTN
UPF0178 protein HMPREF9463_00714 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_072_000G1_scaffold_417_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24973..25575)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZP22_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75156.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
putative integral membrane protein
L3_072_000G1_scaffold_417_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25811..26482
DNA (672bp) protein (224aa)
Nitroreductase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAQ5_9ACTN
Nitroreductase family protein {ECO:0000313|EMBL:EBA39222.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
nitroreductase
L3_072_000G1_scaffold_417_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26566..27108
DNA (543bp) protein (181aa)
Conserved domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8W0_9ACTN
Conserved domain protein {ECO:0000313|EMBL:CDA36118.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
phosphoglycerate mutase
L3_072_000G1_scaffold_417_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27126..27761
DNA (636bp) protein (212aa)
Phosphoglycerate mutase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHT8_9ACTN
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:CDA36119.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
phosphoglycerate mutase
L3_072_000G1_scaffold_417_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27891..28580)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBA2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36120.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_072_000G1_scaffold_417_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28620..29840)
DNA (1221bp) protein (407aa)
Peptidase dimerization domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAQ9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75151.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
peptidase M20
L3_072_000G1_scaffold_417_30
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30064..31044
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D4V8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD84567.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
Displaying items 1-30 of 46 in total

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