ggKbase home page

L3_072_000G1_scaffold_430

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_430_1
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

688..930
DNA (243bp) protein (81aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A7V454_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY73385.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
transposase
L3_072_000G1_scaffold_430_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1357..1587)
DNA (231bp) protein (77aa)
Uncharacterized protein n=5 Tax=root RepID=A7V456_BACUN
Putative rteC protein {ECO:0000313|EMBL:KDS51104.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L3_072_000G1_scaffold_430_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1592..2365)
DNA (774bp) protein (258aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A7V457_BACUN
Acetyltransferase family protein {ECO:0000313|EMBL:KDS51103.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
GNAT family acetyltransferase
L3_072_000G1_scaffold_430_4
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2374..3213)
DNA (840bp) protein (280aa)
Transcriptional regulator, effector binding domain protein n=3 Tax=Bacteroides uniformis RepID=A7V458_BACUN
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS51102.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
AraC-type transcriptional regulator
L3_072_000G1_scaffold_430_5
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3353..4729)
DNA (1377bp) protein (459aa)
MATE efflux family protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V459_BACUN
MATE efflux family protein {ECO:0000313|EMBL:EDO53746.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
multi antimicrobial extrusion protein MatE
L3_072_000G1_scaffold_430_6
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5366..5575)
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A7V463_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE02460.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
L3_072_000G1_scaffold_430_7
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5810..6259)
DNA (450bp) protein (150aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A7V465_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFA21943.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_072_000G1_scaffold_430_8
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6703..7245)
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A7V467_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFA21944.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Protein of unknown function (DUF2500).
L3_072_000G1_scaffold_430_9
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7374..7616
DNA (243bp) protein (81aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A7V468_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFA21945.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_072_000G1_scaffold_430_10
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7742..8083)
DNA (342bp) protein (114aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V469_BACUN
Putative small-conductance mechanosensitive channel {ECO:0000313|EMBL:EFA21946.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
MscS Mechanosensitive ion channel
L3_072_000G1_scaffold_430_11

Not on your lists

comp(8043..8507)
DNA (465bp) protein (155aa)
Transport protein (Fragment) n=1 Tax=human gut metagenome RepID=K1RRX8_9ZZZZ
Transport protein {ECO:0000313|EMBL:EKC44230.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
MscS Mechanosensitive ion channel
L3_072_000G1_scaffold_430_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8742..11054
DNA (2313bp) protein (771aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I8ZKB9_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY73368.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
putative TonB-dependent transmembrane receptor protein
L3_072_000G1_scaffold_430_13
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11054..11704
DNA (651bp) protein (217aa)
Nicotinamide mononucleotide transporter PnuC n=3 Tax=Bacteroides RepID=D2EVH1_9BACE
Nicotinamide mononucleotide transporter PnuC {ECO:0000313|EMBL:EIY73367.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
nicotinamide mononucleotide transporter PnuC
L3_072_000G1_scaffold_430_14
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11712..12389
DNA (678bp) protein (226aa)
Thiamine diphosphokinase {ECO:0000313|EMBL:EFA21949.1}; EC=2.7.6.2 {ECO:0000313|EMBL:EFA21949.1};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Thiamine diphosphokinase n=2 Tax=Bacteroides RepID=D2EVH2_9BACE
thiamine diphosphokinase
L3_072_000G1_scaffold_430_15
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12349..13257)
DNA (909bp) protein (303aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I8ZD01_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY73365.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
putative permease
L3_072_000G1_scaffold_430_16
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13479..13802
DNA (324bp) protein (108aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=D2EVH5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS51088.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
L3_072_000G1_scaffold_430_17
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14124..15425)
DNA (1302bp) protein (434aa)
L-threonine synthase (EC:4.2.3.1)
Threonine synthase n=3 Tax=Bacteroides RepID=I8ZKB5_BACUN
Threonine synthase {ECO:0000313|EMBL:CDE02448.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
L3_072_000G1_scaffold_430_18
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15496..16755)
DNA (1260bp) protein (420aa)
phosphoglycerate mutase (EC:5.4.2.1)
Putative homoserine kinase n=2 Tax=Bacteroides uniformis RepID=I8ZEK6_BACUN
Putative homoserine kinase {ECO:0000313|EMBL:EIY73362.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L3_072_000G1_scaffold_430_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16777..19209)
DNA (2433bp) protein (811aa)
aspartate kinase (EC:1.1.1.3 2.7.2.4)
Homoserine dehydrogenase n=7 Tax=Bacteroides RepID=A7V480_BACUN
Aspartate kinase {ECO:0000313|EMBL:EIY73361.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L3_072_000G1_scaffold_430_20
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19658..20695
DNA (1038bp) protein (346aa)
asparaginase (EC:3.5.1.1)
L-asparaginase, type I n=4 Tax=Bacteroides RepID=D2EVH9_9BACE
L-asparaginase, type I {ECO:0000313|EMBL:EIY73360.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L3_072_000G1_scaffold_430_21
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20706..21248)
DNA (543bp) protein (181aa)
Carbonate dehydratase {ECO:0000313|EMBL:EFA21957.1}; EC=4.2.1.1 {ECO:0000313|EMBL:EFA21957.1};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Carbonate dehydratase n=6 Tax=Bacteroides RepID=D2EVI0_9BACE
carbonate dehydratase
L3_072_000G1_scaffold_430_22
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21370..22737
DNA (1368bp) protein (456aa)
DNA repair protein radA n=4 Tax=Bacteroides RepID=D2EVI1_9BACE
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
DNA replication and repair protein RadA
L3_072_000G1_scaffold_430_23
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22743..24365
DNA (1623bp) protein (541aa)
Uncharacterized protein n=5 Tax=root RepID=I8ZEK1_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY73357.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L3_072_000G1_scaffold_430_24
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24459..28451
DNA (3993bp) protein (1331aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EJ42_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDE02441.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
two-component system sensor histidine kinase/response regulator
L3_072_000G1_scaffold_430_25
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28541..29152
DNA (612bp) protein (204aa)
Transcriptional regulator, LuxR family n=7 Tax=Bacteroides RepID=A7V486_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY73354.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
LuxR family transcriptional regulator
L3_072_000G1_scaffold_430_26
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29417..31873
DNA (2457bp) protein (819aa)
TonB-dependent receptor n=1 Tax=Bacteroides sp. D20 RepID=D2EVI5_9BACE
TonB-dependent receptor {ECO:0000313|EMBL:EFA21962.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
TonB-dependent receptor
L3_072_000G1_scaffold_430_27
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31986..32348)
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I8ZEJ8_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY73352.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
DNA binding protein
L3_072_000G1_scaffold_430_28
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32386..32673)
DNA (288bp) protein (96aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7V489_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY73351.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L3_072_000G1_scaffold_430_29
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32750..33805)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=D2EVI8_9BACE
Putative membrane protein {ECO:0000313|EMBL:KDS51074.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L3_072_000G1_scaffold_430_30
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33847..35712)
DNA (1866bp) protein (622aa)
Peptidase, U32 family n=2 Tax=Bacteroides RepID=D2EVI9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE02435.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
peptidase U32
Displaying items 1-30 of 52 in total

View Taxonomy