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L3_072_000G1_scaffold_433

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Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_433_1
Actinomyces johnsonii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..132)
DNA (132bp) protein (44aa)
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase n=7 Tax=Actinomyces RepID=F9PGM1_9ACTO
Biotin-requiring enzyme {ECO:0000313|EMBL:ERH15496.1}; Flags: Fragment;; TaxID=1227262 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces johnsonii F0510.;"
2-oxoglutarate dehydrogenase E2 component
L3_072_000G1_scaffold_433_2
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(171..1544)
DNA (1374bp) protein (458aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
UPI0003D5FB56 related cluster n=1 Tax=unknown RepID=UPI0003D5FB56
dihydrolipoamide dehydrogenase
L3_072_000G1_scaffold_433_3
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1721..3340)
DNA (1620bp) protein (540aa)
leucyl aminopeptidase (EC:3.4.11.1)
UPI0003D67505 related cluster n=1 Tax=unknown RepID=UPI0003D67505
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
L3_072_000G1_scaffold_433_4
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3513..3917
DNA (405bp) protein (135aa)
UPI0003069570 related cluster n=1 Tax=unknown RepID=UPI0003069570
Uncharacterized protein {ECO:0000313|EMBL:ETJ04682.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
integral membrane protein
L3_072_000G1_scaffold_433_5
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3914..5821)
DNA (1908bp) protein (636aa)
Chloride transporter, ClC family n=3 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3U3_9ACTO
Chloride transporter, ClC family {ECO:0000313|EMBL:EEH66619.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
hypothetical protein
L3_072_000G1_scaffold_433_6
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5827..7848)
DNA (2022bp) protein (674aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EEH66618.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEH66618.1};; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
peptidase S9, prolyl oligopeptidase active site region (EC:3.4.19.1)
Peptidase, S9A/B/C family, catalytic domain protein n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3U2_9ACTO
L3_072_000G1_scaffold_433_7
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8123..10159
DNA (2037bp) protein (679aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00021618}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3U1_9ACTO
deoxyxylulose-5-phosphate synthase
L3_072_000G1_scaffold_433_8
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10444..12564
DNA (2121bp) protein (707aa)
Formate C-acetyltransferase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3U0_9ACTO
Formate acetyltransferase {ECO:0000313|EMBL:KGF02124.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
formate acetyltransferase
L3_072_000G1_scaffold_433_9
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12654..12899
DNA (246bp) protein (82aa)
Putative autonomous glycyl radical cofactor GrcA n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T9_9ACTO
Formate acetyltransferase {ECO:0000313|EMBL:KGF02123.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
formate acetyltransferase
L3_072_000G1_scaffold_433_10
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12925..13809
DNA (885bp) protein (295aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
Pyruvate formate-lyase 1-activating enzyme n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T8_9ACTO
pyruvate formate lyase-activating protein
L3_072_000G1_scaffold_433_11
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13894..15189)
DNA (1296bp) protein (432aa)
3'-5' exonuclease n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T7_9ACTO
3'-5' exonuclease {ECO:0000313|EMBL:KGF01815.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
ribonuclease D
L3_072_000G1_scaffold_433_12
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15186..15797)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EEH66612.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
hypothetical protein
L3_072_000G1_scaffold_433_13
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15952..17205
DNA (1254bp) protein (418aa)
Uncharacterized protein n=3 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T5_9ACTO
ATP-dependent carboxylate-amine ligase {ECO:0000313|EMBL:KGF01813.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
ATP-grasp protein-like protein
L3_072_000G1_scaffold_433_14
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17174..19438)
DNA (2265bp) protein (755aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
UPI0003D65D82 related cluster n=1 Tax=unknown RepID=UPI0003D65D82
glycogen debranching protein GlgX
L3_072_000G1_scaffold_433_15
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19818..21047
DNA (1230bp) protein (410aa)
ATP-grasp domain protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T3_9ACTO
Carboxylate--amine ligase {ECO:0000313|EMBL:KGF03845.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
hypothetical protein
L3_072_000G1_scaffold_433_16
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21151..22224
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T2_9ACTO
FemAB family protein {ECO:0000313|EMBL:KGF03844.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
peptidoglycan bridge formation protein FemAB
L3_072_000G1_scaffold_433_17
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22314..24353
DNA (2040bp) protein (680aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
Threonine--tRNA ligase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T1_9ACTO
threonine--tRNA ligase
L3_072_000G1_scaffold_433_18
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24350..25000
DNA (651bp) protein (217aa)
Histidine triad domain protein n=3 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T0_9ACTO
Histidine triad domain protein {ECO:0000313|EMBL:EEH66606.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
L3_072_000G1_scaffold_433_19
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25056..25718
DNA (663bp) protein (221aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3S9_9ACTO
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ETJ02115.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
CDP-alcohol phosphatidyltransferase
L3_072_000G1_scaffold_433_20
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25715..26791
DNA (1077bp) protein (359aa)
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3S8_9ACTO
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:KGF03840.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
lipid A biosynthesis acyltransferase
L3_072_000G1_scaffold_433_21
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26788..27978
DNA (1191bp) protein (397aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEH66603.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEH66603.1};; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3S7_9ACTO
group 1 glycosyl transferase
L3_072_000G1_scaffold_433_22
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27975..28643
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3S6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EEH66602.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
hypothetical protein
L3_072_000G1_scaffold_433_23
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28640..29764
DNA (1125bp) protein (375aa)
Uncharacterized protein (Fragment) n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3S5_9ACTO
Putative integral membrane protein {ECO:0000313|EMBL:ETJ02119.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
membrane protein
L3_072_000G1_scaffold_433_24
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29761..30396
DNA (636bp) protein (212aa)
UPI0003D63AAB related cluster n=1 Tax=unknown RepID=UPI0003D63AAB
MutT family protein {ECO:0000313|EMBL:ETJ02120.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
NUDIX hydrolase
L3_072_000G1_scaffold_433_25
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30489..31385
DNA (897bp) protein (299aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
UPI0003D62C47 related cluster n=1 Tax=unknown RepID=UPI0003D62C47
pyridoxine biosynthesis protein
L3_072_000G1_scaffold_433_26
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31394..32134
DNA (741bp) protein (247aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
Glutamine amidotransferase subunit PdxT n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3S1_9ACTO
SNO glutamine amidotransferase
L3_072_000G1_scaffold_433_27
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32198..32962
DNA (765bp) protein (255aa)
Probable transcriptional regulatory protein HMPREF0058_0514 n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3S0_9ACTO
Probable transcriptional regulatory protein HMPREF1626_03205 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
hypothetical protein
L3_072_000G1_scaffold_433_28
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33036..33650
DNA (615bp) protein (205aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
ruvC; Holliday junction resolvase (EC:3.1.22.4)
UPI0003D61F1F related cluster n=1 Tax=unknown RepID=UPI0003D61F1F
L3_072_000G1_scaffold_433_29
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33720..34349
DNA (630bp) protein (210aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3R8_9ACTO
Holliday junction DNA helicase RuvA
L3_072_000G1_scaffold_433_30
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34441..35373
DNA (933bp) protein (311aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
UPI0003D64B97 related cluster n=1 Tax=unknown RepID=UPI0003D64B97
Holliday junction ATP-dependent DNA helicase ruvB
Displaying items 1-30 of 41 in total

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