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L3_072_000G1_scaffold_457

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_457_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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56..3079
DNA (3024bp) protein (1008aa)
Export membrane protein SecD n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UDC9_9BACE
Export membrane protein SecD {ECO:0000313|EMBL:CCZ73624.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
protein translocase subunit secF/protein translocase subunit secD
L3_072_000G1_scaffold_457_2
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3543..5381
DNA (1839bp) protein (613aa)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit (EC:1.2.7.3)
2-oxoacid:acceptor oxidoreductase alpha subunit n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U6B3_9BACE
2-oxoacid:acceptor oxidoreductase alpha subunit {ECO:0000313|EMBL:CCZ73623.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_072_000G1_scaffold_457_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5385..6395
DNA (1011bp) protein (337aa)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit (EC:1.2.7.3)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PRA0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19106.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_072_000G1_scaffold_457_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6582..8969)
DNA (2388bp) protein (796aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UR52_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73621.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
frrI; hypothetical protein
L3_072_000G1_scaffold_457_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9073..10989)
DNA (1917bp) protein (639aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=Q64ZQ5_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD47021.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_072_000G1_scaffold_457_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11005..14400)
DNA (3396bp) protein (1132aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U6E6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73585.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative outer membrane protein
L3_072_000G1_scaffold_457_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14554..15678)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UDA1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73584.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Fe2+-dicitrate sensor, membrane component
L3_072_000G1_scaffold_457_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15844..16392)
DNA (549bp) protein (183aa)
RNA polymerase sigma-70 factor expansion family 1 n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U675_9BACE
RNA polymerase sigma-70 factor expansion family 1 {ECO:0000313|EMBL:CCZ73583.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase ECF-type sigma factor
L3_072_000G1_scaffold_457_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16534..17760)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UY07_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73582.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000G1_scaffold_457_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17778..18110)
DNA (333bp) protein (111aa)
Ribosome-binding factor A n=3 Tax=Bacteroides RepID=A5ZB02_9BACE
Ribosome-binding factor A {ECO:0000313|EMBL:EIY19109.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ribosome-binding factor A
L3_072_000G1_scaffold_457_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18123..18761)
DNA (639bp) protein (213aa)
O-methyltransferase n=3 Tax=Bacteroides RepID=A5ZB01_9BACE
O-methyltransferase {ECO:0000313|EMBL:EDM21679.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Predicted O-methyltransferase
L3_072_000G1_scaffold_457_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18776..20233)
DNA (1458bp) protein (486aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=2 Tax=Bacteroides RepID=I9PRA4_9BACE
L3_072_000G1_scaffold_457_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20262..20684)
DNA (423bp) protein (141aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=3 Tax=Bacteroides RepID=A5ZAZ9_9BACE
L3_072_000G1_scaffold_457_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20830..21780
DNA (951bp) protein (317aa)
Tyrosine recombinase XerC n=3 Tax=Bacteroides RepID=A5ZAZ8_9BACE
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
integrase
L3_072_000G1_scaffold_457_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21927..22037
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9AFH4_9BACE
Tetratricopeptide repeat.
Uncharacterized protein {ECO:0000313|EMBL:EGN04581.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_072_000G1_scaffold_457_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22003..23493
DNA (1491bp) protein (497aa)
Tetratricopeptide repeat protein n=2 Tax=Bacteroides RepID=A5ZB12_9BACE
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CCZ73576.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Tetratricopeptide repeat.
L3_072_000G1_scaffold_457_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23655..25283
DNA (1629bp) protein (543aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I8UY52_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19115.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000G1_scaffold_457_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25481..26689
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UD95_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73574.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000G1_scaffold_457_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26828..27898
DNA (1071bp) protein (357aa)
Antioxidant AhpC/TSA family n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U668_9BACE
Antioxidant AhpC/TSA family {ECO:0000313|EMBL:CCZ73573.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
AhpC/TSA family.
L3_072_000G1_scaffold_457_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27912..28913
DNA (1002bp) protein (334aa)
Mg chelatase-like protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PRU9_9BACE
Mg chelatase-like protein {ECO:0000313|EMBL:EIY19118.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
magnesium chelatase subunit ChlI
L3_072_000G1_scaffold_457_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29052..29174)
DNA (123bp) protein (41aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8Y1C3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY56925.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_072_000G1_scaffold_457_22
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29235..29930)
DNA (696bp) protein (232aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A7LWC3_BACOV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK67110.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_072_000G1_scaffold_457_23
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29995..30240)
DNA (246bp) protein (82aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A7LWC4_BACOV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK67111.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_072_000G1_scaffold_457_24
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30354..30593)
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8V1G9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY56922.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_072_000G1_scaffold_457_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31306..31497
DNA (192bp) protein (64aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A7LWC6_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO12240.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_072_000G1_scaffold_457_26
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31840..32022
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8Y1B8_BACOV
Uncharacterized protein {ECO:0000313|EMBL:CDM04288.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
L3_072_000G1_scaffold_457_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31976..32788
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7LWC7_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO12241.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_072_000G1_scaffold_457_28
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32913..33164)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=I0Q070_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIC73123.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_072_000G1_scaffold_457_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33376..34293
DNA (918bp) protein (306aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A5ZK52_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19540.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000G1_scaffold_457_30
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34685..34987
DNA (303bp) protein (101aa)
Site-specific recombinase XerD n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6CY63_9BACE
Site-specific recombinase XerD
Integrase {ECO:0000313|EMBL:EFI38574.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
Displaying items 1-30 of 65 in total

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