ggKbase home page

L3_072_000G1_scaffold_463

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_463_1
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..481)
DNA (480bp) protein (160aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
Glycerol kinase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2I8_CLOSW
glycerol kinase
L3_072_000G1_scaffold_463_2
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(659..3265)
DNA (2607bp) protein (869aa)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2I9_CLOSW
ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:ADL06613.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
P-type HAD superfamily ATPase
L3_072_000G1_scaffold_463_3
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3334..4086)
DNA (753bp) protein (251aa)
Iron compound ABC transporter, ATP-binding protein n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SCP2_9BACL
ABC transporter family protein {ECO:0000313|EMBL:KIE47869.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC-type enterochelin transport system, ATPase component
L3_072_000G1_scaffold_463_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4083..5144)
DNA (1062bp) protein (354aa)
Transport system permease protein n=3 Tax=Desulfitobacterium hafniense RepID=B8FYL4_DESHD
FecCD transport family protein {ECO:0000313|EMBL:KIE47814.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
transporter permease
L3_072_000G1_scaffold_463_5
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5141..6163)
DNA (1023bp) protein (341aa)
ABC-type enterochelin transport system, permease component n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A9R6_DESDJ
ABC-type enterochelin transport system, permease component
ABC-type enterochelin transport system, permease component {ECO:0000313|EMBL:AFM00701.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
L3_072_000G1_scaffold_463_6
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6172..7218)
DNA (1047bp) protein (349aa)
Periplasmic binding protein n=3 Tax=Desulfitobacterium hafniense RepID=B8FYL6_DESHD
ABC-type enterochelin transport system, periplasmic component {ECO:0000313|EMBL:EXG84001.1}; Flags: Precursor;; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_072_000G1_scaffold_463_7
[Eubacterium] cellulosolvens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7318..7452)
DNA (135bp) protein (45aa)
Putative transcriptional regulator n=1 Tax=Eubacterium cellulosolvens 6 RepID=I5ASG8_EUBCE
Putative transcriptional regulator {ECO:0000313|EMBL:EIM56741.1}; TaxID=633697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] cellulosolvens 6.;"
hypothetical protein
L3_072_000G1_scaffold_463_8
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7686..8168
DNA (483bp) protein (161aa)
quorum-sensing autoinducer 2 (AI-2), LuxS (EC:4.4.1.21)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
S-ribosylhomocysteine lyase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2J3_CLOSW
L3_072_000G1_scaffold_463_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8263..8664
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UCL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15659.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Rrf2 family protein
L3_072_000G1_scaffold_463_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8717..10600
DNA (1884bp) protein (628aa)
cooS_2; carbon-monoxide dehydrogenase, catalytic subunit (EC:1.2.99.2)
Carbon-monoxide dehydrogenase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLR3_9FIRM
Carbon-monoxide dehydrogenase {ECO:0000313|EMBL:CCZ66653.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_072_000G1_scaffold_463_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10612..11064
DNA (453bp) protein (151aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TTQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44474.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein
L3_072_000G1_scaffold_463_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11061..12290
DNA (1230bp) protein (410aa)
noxA; nitrate reductase, NADH oxidase subunit NoxA (EC:1.7.1.4)
Nitrate reductase, NADH oxidase subunit n=2 Tax=Clostridium RepID=B6FR07_9CLOT
Nitrate reductase, NADH oxidase subunit {ECO:0000313|EMBL:EEA81515.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_072_000G1_scaffold_463_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12365..12826)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WW30_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY91702.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
putative HD superfamily hydrolase
L3_072_000G1_scaffold_463_14
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12995..13162
DNA (168bp) protein (56aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R5C1_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:EXG87918.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_072_000G1_scaffold_463_15
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13333..13617
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R710_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL05442.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_463_16
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13676..13963
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R711_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:KEZ90723.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L3_072_000G1_scaffold_463_17
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14000..15730
DNA (1731bp) protein (577aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R712_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:EXG87970.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_072_000G1_scaffold_463_18
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15760..15924
DNA (165bp) protein (55aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R713_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:KEZ90725.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L3_072_000G1_scaffold_463_19
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15949..16275
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R714_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL05446.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_463_20
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16272..16571
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R715_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL05447.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_463_21
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16586..16837
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R716_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:EXG87974.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_072_000G1_scaffold_463_22
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16834..17814
DNA (981bp) protein (327aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R717_CLOSW
NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family {ECO:0000313|EMBL:EXG87975.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
NAD-dependent epimerase/dehydratase
L3_072_000G1_scaffold_463_23
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17835..18983
DNA (1149bp) protein (383aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R718_CLOSW
Aminotransferase DegT {ECO:0000313|EMBL:KEZ90729.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
DegT/DnrJ/EryC1/StrS aminotransferase
L3_072_000G1_scaffold_463_24
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19007..20053
DNA (1047bp) protein (349aa)
Nucleotidyl transferase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R719_CLOSW
Nucleoside-diphosphate-sugar pyrophosphorylase family protein {ECO:0000313|EMBL:EXG87977.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
nucleotidyltransferase
L3_072_000G1_scaffold_463_25
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20050..20733
DNA (684bp) protein (228aa)
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R720_CLOSW
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family {ECO:0000313|EMBL:EXG87978.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family
L3_072_000G1_scaffold_463_26
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20690..21685
DNA (996bp) protein (332aa)
N-acetylneuraminate synthase {ECO:0000313|EMBL:EXG87979.1}; EC=2.5.1.56 {ECO:0000313|EMBL:EXG87979.1};; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
N-acetylneuraminate synthase (EC:2.5.1.56)
N-acetylneuraminate synthase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R721_CLOSW
L3_072_000G1_scaffold_463_27
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21682..22845
DNA (1164bp) protein (388aa)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R722_CLOSW
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing {ECO:0000313|EMBL:EXG87980.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
UDP-N-acetyl-D-glucosamine 2-epimerase
L3_072_000G1_scaffold_463_28
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22845..23564
DNA (720bp) protein (240aa)
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43)
N-acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:ADL05455.1}; EC=2.7.7.43 {ECO:0000313|EMBL:ADL05455.1};; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
N-acylneuraminate cytidylyltransferase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R723_CLOSW
L3_072_000G1_scaffold_463_29
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23677..24144)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KJ96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EXG86634.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
cupin 2 domain-containing protein
L3_072_000G1_scaffold_463_30
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24195..26027)
DNA (1833bp) protein (611aa)
Alpha amylase catalytic region n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2K3_CLOSW
alpha amylase
Alpha amylase catalytic region {ECO:0000313|EMBL:ADL06627.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
Displaying items 1-30 of 51 in total

View Taxonomy