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L3_072_000G1_scaffold_471

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_471_1
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..803)
DNA (801bp) protein (267aa)
Triple helix repeat-containing collagen n=1 Tax=Clostridium intestinale URNW RepID=U2Q7Z6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK29244.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
L3_072_000G1_scaffold_471_2
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1631..2950
DNA (1320bp) protein (440aa)
Replication-associated recombination protein A n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5SWR1_9CLOT
Replication-associated recombination protein A {ECO:0000313|EMBL:CCZ58185.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ATPase AAA
L3_072_000G1_scaffold_471_3
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3116..4858
DNA (1743bp) protein (581aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
Transcription termination factor Rho n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3V2_CLOSW
transcription termination factor Rho
L3_072_000G1_scaffold_471_4
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4993..5199
DNA (207bp) protein (69aa)
50S ribosomal protein L31 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3V3_CLOSW
50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
L3_072_000G1_scaffold_471_5
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5307..6251
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3V4_CLOSW
Putative metal-dependent enzyme {ECO:0000313|EMBL:EXG84805.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_072_000G1_scaffold_471_6
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6248..7114
DNA (867bp) protein (289aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
protein-(glutamine-N5) methyltransferase (EC:2.1.1.72)
Release factor glutamine methyltransferase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3V5_CLOSW
L3_072_000G1_scaffold_471_7
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7156..8229
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3V6_CLOSW
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
peptide chain release factor 1
L3_072_000G1_scaffold_471_8
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9750..10718
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TMI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ58177.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L3_072_000G1_scaffold_471_9
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10702..12960
DNA (2259bp) protein (753aa)
Putative cell wall binding repeat-containing protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3U0_CLOSW
Cell wall-binding repeat-containing protein {ECO:0000313|EMBL:EXG84792.1}; Flags: Precursor;; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
cell wall binding repeat-containing protein
L3_072_000G1_scaffold_471_10
unknown

Not on your lists

12971..13135
DNA (165bp) protein (55aa)

This feature has no annotations

L3_072_000G1_scaffold_471_11
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13132..20484
DNA (7353bp) protein (2451aa)
Cell wall/surface repeat protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3U2_CLOSW
cell wall/surface repeat protein
Cell wall/surface repeat protein {ECO:0000313|EMBL:ADL03055.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_471_12
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20493..24677
DNA (4185bp) protein (1395aa)
Ig domain protein group 2 domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3U3_CLOSW
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:ADL03056.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
Ig domain-containing protein
L3_072_000G1_scaffold_471_13
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24925..25131)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ17_CLOSY
XRE family transcriptional regulator
Putative transcriptional regulator, XRE family {ECO:0000313|EMBL:ADL53227.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_072_000G1_scaffold_471_14
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25337..25519
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3U6_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL03059.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_471_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25629..26363
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZN00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44749.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Cysteine-rich secretory protein family./Putative cell wall binding repeat.
L3_072_000G1_scaffold_471_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26447..40456
DNA (14010bp) protein (4670aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XLM3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY96888.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
LPXTG-motif cell wall anchor domain-containing protein
L3_072_000G1_scaffold_471_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40676..41563
DNA (888bp) protein (296aa)
SrtB family sortase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XAY7_9CLOT
SrtB family sortase {ECO:0000313|EMBL:ENY96887.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_072_000G1_scaffold_471_18
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41600..42577
DNA (978bp) protein (326aa)
Oxidoreductase domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3W5_CLOSW
Oxidoreductase {ECO:0000313|EMBL:KEZ91251.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
oxidoreductase domain-containing protein
L3_072_000G1_scaffold_471_19
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42731..43267)
DNA (537bp) protein (179aa)
Glucan-binding domain (YG repeat)-like protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3W6_CLOSW
Cell wall-binding repeat-containing protein {ECO:0000313|EMBL:EXG84819.1}; Flags: Precursor;; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
Glucan-binding domain (YG repeat)-like protein
L3_072_000G1_scaffold_471_20
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43492..46080
DNA (2589bp) protein (863aa)
ATP-dependent chaperone ClpB n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3W7_CLOSW
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ATP-dependent chaperone ClpB
L3_072_000G1_scaffold_471_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46211..47215)
DNA (1005bp) protein (335aa)
L-asparaginase, type I n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XAY2_9CLOT
L-asparaginase, type I {ECO:0000313|EMBL:ENY96882.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
type I L-asparaginase
L3_072_000G1_scaffold_471_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47344..47523
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XMM2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY96881.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
Displaying 22 items

View Taxonomy