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L3_072_000G1_scaffold_472

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_472_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..232
DNA (231bp) protein (77aa)
Glycosyl hydrolase family 32 n=5 Tax=Bifidobacterium breve RepID=F6C880_BIFBA
Beta-fructofuranosidase
Uncharacterized protein {ECO:0000313|EMBL:EPD75661.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_072_000G1_scaffold_472_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(376..1143)
DNA (768bp) protein (256aa)
ppgK; polyphosphate--glucose phosphotransferase (EC:2.7.1.63)
ROK family protein n=7 Tax=Bifidobacterium breve RepID=F6C879_BIFBA
Putative glucokinase {ECO:0000313|EMBL:BAR00419.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_072_000G1_scaffold_472_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1372..2154
DNA (783bp) protein (261aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=F6C878_BIFBA
Nitroreductase family protein
Nitroreductase family protein {ECO:0000313|EMBL:AHJ21494.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_072_000G1_scaffold_472_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2293..3306)
DNA (1014bp) protein (338aa)
Glycosyltransferase, group 2 family protein n=6 Tax=Bifidobacterium breve RepID=F6C877_BIFBA
dTDP-rhamnosyl transferase rfbF
dTDP-rhamnosyl transferase rfbF {ECO:0000313|EMBL:AHJ21495.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_072_000G1_scaffold_472_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3597..4253
DNA (657bp) protein (219aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=D4BRJ6_BIFBR
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ21496.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_072_000G1_scaffold_472_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4267..6618
DNA (2352bp) protein (784aa)
Cobalt ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium breve RepID=F6C875_BIFBA
Fused ATP binding protein and permease of ABC transporter
Fused ATP binding protein and permease of ABC transporter {ECO:0000313|EMBL:AHJ21497.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_072_000G1_scaffold_472_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6683..6988
DNA (306bp) protein (102aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=S3A0E9_BIFBR
putative RNA binding protein
Putative RNA-binding protein, YhbY family {ECO:0000313|EMBL:EFE88839.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR00424.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_072_000G1_scaffold_472_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7073..7438)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C873_BIFBA
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27460.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_072_000G1_scaffold_472_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7849..8232
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C872_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26617.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_072_000G1_scaffold_472_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8309..9295)
DNA (987bp) protein (329aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:AEF27608.1}; EC=1.1.1.290 {ECO:0000313|EMBL:AEF27608.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
4-phosphoerythronate dehydrogenase n=2 Tax=Bifidobacterium breve RepID=F6C871_BIFBA
hypothetical protein with hydroxyacid dehydrogenase catalytic domain
L3_072_000G1_scaffold_472_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9547..11007
DNA (1461bp) protein (487aa)
Transport protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KZ93_BIFBR
Transporter, member of MFS
Transporter, major facilitator family protein {ECO:0000313|EMBL:AEF26831.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_072_000G1_scaffold_472_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11011..11475)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A0F5_BIFBR
Truncated two-component sensor kinase {ECO:0000313|EMBL:BAR00429.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Two-component response regulator
L3_072_000G1_scaffold_472_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11438..11590)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRI7_BIFBR
Truncated two-component response regulator {ECO:0000313|EMBL:BAR00430.1}; Uncharacterized protein {ECO:0000313|EMBL:EFE88832.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_072_000G1_scaffold_472_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11650..13029)
DNA (1380bp) protein (460aa)
Recombination factor protein RarA n=2 Tax=Bifidobacterium breve RepID=F6C869_BIFBA
AAA family ATPase
Recombination factor protein RarA {ECO:0000313|EMBL:AEF26361.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_072_000G1_scaffold_472_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13132..15702)
DNA (2571bp) protein (857aa)
DEAD/DEAH box helicase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C868_BIFBA
DEAD/DEAH box helicase {ECO:0000313|EMBL:AEF27525.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
DEAD/DEAH box-like helicase
L3_072_000G1_scaffold_472_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15790..16863)
DNA (1074bp) protein (358aa)
Polyphosphate:nucleotide phosphotransferase, PPK2 family n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KZ90_BIFBR
Hypothetical protein with DUF344 domain
Uncharacterized protein {ECO:0000313|EMBL:AHJ21506.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_072_000G1_scaffold_472_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16923..18404)
DNA (1482bp) protein (494aa)
Transcriptional regulator, GntR family n=2 Tax=Bifidobacterium breve RepID=F6C866_BIFBA
Multiple substrate aminotransferase (MsaT) containing domain of GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AEF28110.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_072_000G1_scaffold_472_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18685..19344
DNA (660bp) protein (220aa)
Translocator protein, LysE family n=3 Tax=Bifidobacterium breve RepID=F6C865_BIFBA
translocator protein, LysE family
Translocator protein, LysE family {ECO:0000313|EMBL:AEF27424.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_072_000G1_scaffold_472_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19328..20872)
DNA (1545bp) protein (515aa)
PAP2 family protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C864_BIFBA
PAP2 domain protein
PAP2 family protein {ECO:0000313|EMBL:AEF26452.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_072_000G1_scaffold_472_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20968..22068)
DNA (1101bp) protein (367aa)
ABC transporter, permease protein n=3 Tax=Bifidobacterium breve RepID=F6C863_BIFBA
Glutamate transport system permease protein gluD
ABC transporter, permease protein {ECO:0000313|EMBL:AEF26715.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_072_000G1_scaffold_472_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22074..22751)
DNA (678bp) protein (226aa)
Glutamate transport system permease protein gluC n=5 Tax=Bifidobacterium breve RepID=F9Y255_BIFBU
Glutamate transport system permease protein gluC
Glutamate transport system permease protein gluC {ECO:0000313|EMBL:ABE96017.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_072_000G1_scaffold_472_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22751..23551)
DNA (801bp) protein (267aa)
ABC transporter, substrate-binding protein, family 3 n=3 Tax=Bifidobacterium breve RepID=F6C861_BIFBA
Glutamate-binding protein gluB
Glutamate ABC transporter substrate binding component {ECO:0000313|EMBL:BAR00439.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_072_000G1_scaffold_472_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23609..24472)
DNA (864bp) protein (288aa)
Glutamate transport ATP-binding protein GluA n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AH82_BIFBR
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE88822.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Glutamate transport ATP-binding protein gluA
L3_072_000G1_scaffold_472_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24504..25055)
DNA (552bp) protein (184aa)
YbaK/proline--tRNA ligase associated domain protein n=5 Tax=Bifidobacterium breve RepID=F6C859_BIFBA
Hypothetical protein with YbaK / prolyl-tRNA synthetases associated domain
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:AEF28109.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_072_000G1_scaffold_472_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(25259..27058)
DNA (1800bp) protein (600aa)
Aspartate--tRNA ligase n=6 Tax=Bifidobacterium breve RepID=F6C858_BIFBA
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AHJ21515.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Aspartyl-tRNA synthetase
L3_072_000G1_scaffold_472_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(27094..28557)
DNA (1464bp) protein (488aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Histidine--tRNA ligase n=4 Tax=Bifidobacterium breve RepID=F6C857_BIFBA
Histidyl-tRNA synthetase
L3_072_000G1_scaffold_472_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28585..30030
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZG49_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75688.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Hypothetical protein with DUF349 domain
L3_072_000G1_scaffold_472_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30193..31977)
DNA (1785bp) protein (595aa)
Calcineurin-like phosphoesterase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y262_BIFBU
Calcineurin-like phosphoesterase {ECO:0000313|EMBL:ABE96024.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Calcineurin-like phosphoesterase
L3_072_000G1_scaffold_472_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32066..32824)
DNA (759bp) protein (253aa)
Creatininase (EC:3.5.2.10)
Creatininase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y263_BIFBU
Creatininase {ECO:0000313|EMBL:AHJ21519.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_072_000G1_scaffold_472_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32932..34308)
DNA (1377bp) protein (459aa)
Proline/betaine transporter n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y264_BIFBU
Proline/betaine transporter
Proline/betaine transporter {ECO:0000313|EMBL:AHJ21520.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Displaying items 1-30 of 42 in total

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