ggKbase home page

L3_072_000G1_scaffold_489

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_489_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..150)
DNA (150bp) protein (50aa)
Toprim domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WC65_BACOV
AAA domain protein {ECO:0000313|EMBL:EXZ29594.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
hypothetical protein
L3_072_000G1_scaffold_489_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(113..472)
DNA (360bp) protein (120aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=D4X0W6_9BACE
Helix-turn-helix domain protein {ECO:0000313|EMBL:EXZ29595.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
hypothetical protein
L3_072_000G1_scaffold_489_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(681..1523)
DNA (843bp) protein (281aa)
RteC protein n=3 Tax=Bacteroidales RepID=D4WC63_BACOV
RteC family protein {ECO:0000313|EMBL:EYE55204.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
regulatory protein
L3_072_000G1_scaffold_489_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1543..1947)
DNA (405bp) protein (135aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=I9Q1X6_9BACE
Putative lipoprotein {ECO:0000313|EMBL:EFF53822.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_072_000G1_scaffold_489_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1964..2353)
DNA (390bp) protein (130aa)
Uncharacterized protein n=10 Tax=Bacteroidales RepID=B3C813_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22854.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000G1_scaffold_489_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2406..2831)
DNA (426bp) protein (142aa)
Acetyltransferase, GNAT family n=4 Tax=Bacteroidales RepID=D4WGV8_BACOV
Acetyltransferase family protein {ECO:0000313|EMBL:EXY74939.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
Acetyltransferase (GNAT) family.
L3_072_000G1_scaffold_489_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2931..3503)
DNA (573bp) protein (191aa)
Cyclic nucleotide-binding domain protein n=4 Tax=Bacteroidales RepID=D4WGV9_BACOV
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EYE55208.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L3_072_000G1_scaffold_489_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4127..4603)
DNA (477bp) protein (159aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
Respiratory-chain NADH dehydrogenase 24 Kd subunit n=3 Tax=Bacteroides RepID=A5ZGY5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21352.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_072_000G1_scaffold_489_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4622..6388)
DNA (1767bp) protein (589aa)
hydrogenases, Fe-only (EC:1.6.5.3)
Hydrogenase, Fe-only n=2 Tax=Bacteroides caccae RepID=I9PXX5_9BACE
Hydrogenase, Fe-only {ECO:0000313|EMBL:EIY21353.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_072_000G1_scaffold_489_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6400..8307)
DNA (1908bp) protein (636aa)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit (EC:1.6.5.3)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EMB8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21354.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_072_000G1_scaffold_489_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8472..8774
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZGY9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21355.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Heparinase II/III-like protein.
L3_072_000G1_scaffold_489_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8771..9145
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PXC0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21356.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000G1_scaffold_489_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9118..9594)
DNA (477bp) protein (159aa)
Uncharacterized protein n=4 Tax=root RepID=A5ZGZ1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20700.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000G1_scaffold_489_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9654..10943)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZGZ2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21358.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Hemolysins and related proteins containing CBS domains
L3_072_000G1_scaffold_489_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11132..11914)
DNA (783bp) protein (261aa)
Zn-dependent protease with chaperone function (EC:3.4.24.-)
Peptidase, M48 family n=3 Tax=Bacteroides RepID=A5ZGZ3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21359.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_072_000G1_scaffold_489_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11945..14323)
DNA (2379bp) protein (793aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V4J1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21360.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Outer membrane receptor for ferrienterochelin and colicins
L3_072_000G1_scaffold_489_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14399..14875
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PXC5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21361.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000G1_scaffold_489_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14899..15717
DNA (819bp) protein (273aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8V7W1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21362.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
acetyl esterase
L3_072_000G1_scaffold_489_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16091..17500)
DNA (1410bp) protein (470aa)
Peptidase, S41 family n=3 Tax=Bacteroides RepID=A5ZGZ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72972.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Periplasmic protease
L3_072_000G1_scaffold_489_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17657..18721
DNA (1065bp) protein (355aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGZ8_9BACE
L3_072_000G1_scaffold_489_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18763..19422)
DNA (660bp) protein (220aa)
Transcriptional regulator, LuxR family n=2 Tax=Bacteroides caccae RepID=A5ZGZ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21365.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
transcriptional regulator
L3_072_000G1_scaffold_489_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19513..20103)
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PXC9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21366.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000G1_scaffold_489_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20171..21598)
DNA (1428bp) protein (476aa)
Na+/H+ antiporter NhaC n=2 Tax=Bacteroides caccae RepID=A5ZH01_9BACE
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:EDM20710.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Na(+)/H(+) antiporter
L3_072_000G1_scaffold_489_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21753..22187)
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZH02_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21368.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000G1_scaffold_489_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22237..23412)
DNA (1176bp) protein (392aa)
Transporter, major facilitator family protein n=3 Tax=Bacteroides RepID=A5ZH03_9BACE
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDM20712.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Arabinose efflux permease
L3_072_000G1_scaffold_489_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23438..25813)
DNA (2376bp) protein (792aa)
Penicillin-binding protein 1C n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZH04_9BACE
Penicillin-binding protein 1C {ECO:0000313|EMBL:EDM20713.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
penicillin-binding protein 1C
L3_072_000G1_scaffold_489_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25828..31464)
DNA (5637bp) protein (1879aa)
Alpha-2-macroglobulin family protein n=2 Tax=Bacteroides RepID=A5ZH05_9BACE
Alpha-2-macroglobulin family protein {ECO:0000313|EMBL:EDM20714.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Large extracellular alpha-helical protein
L3_072_000G1_scaffold_489_28
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31562..31963
DNA (402bp) protein (134aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
FKBP-type peptidyl-prolyl cis-trans isomerases 1 (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Bacteroides RepID=A5ZH06_9BACE
L3_072_000G1_scaffold_489_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32163..34718)
DNA (2556bp) protein (852aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZH07_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20716.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000G1_scaffold_489_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34996..35139
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EMD4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21374.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Displaying items 1-30 of 49 in total

View Taxonomy