ggKbase home page

L3_072_000G1_scaffold_491

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_491_1
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2..154
DNA (153bp) protein (51aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=712938 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain CECT 5716).;"
Glucose-6-phosphate isomerase n=1 Tax=Lactobacillus fermentum (strain CECT 5716) RepID=D8IH05_LACFC
L3_072_000G1_scaffold_491_2
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

161..358
DNA (198bp) protein (66aa)
Uncharacterized protein n=4 Tax=Lactobacillus fermentum RepID=R4RV98_LACFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDI69853.1}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
L3_072_000G1_scaffold_491_3
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(519..1001)
DNA (483bp) protein (161aa)
Acetyltransferase n=3 Tax=Lactobacillus fermentum RepID=R4RGC0_LACFE
Acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:ERJ49575.1}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L3_072_000G1_scaffold_491_4
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1019..1693)
DNA (675bp) protein (225aa)
Matrixin n=2 Tax=Lactobacillus fermentum RepID=C0WWS6_LACFE
Peptidase M10A and M12B matrixin and adamalysin {ECO:0000313|EMBL:CDI69855.1}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
hypothetical protein
L3_072_000G1_scaffold_491_5
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1753..2601)
DNA (849bp) protein (283aa)
Aldo/keto reductase n=6 Tax=Lactobacillus fermentum RepID=B2GAR8_LACF3
Aldo/keto reductase
Glyoxal reductase {ECO:0000313|EMBL:KJY06963.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
L3_072_000G1_scaffold_491_6
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2741..3517
DNA (777bp) protein (259aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=712938 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain CECT 5716).;"
Triosephosphate isomerase n=6 Tax=Lactobacillus fermentum RepID=B2GAR9_LACF3
triosephosphate isomerase
L3_072_000G1_scaffold_491_7
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3625..4332)
DNA (708bp) protein (236aa)
Alpha-acetolactate decarboxylase n=1 Tax=Lactobacillus fermentum (strain NBRC 3956 / LMG 18251) RepID=B2GAS0_LACF3
alpha-acetolactate decarboxylase
Alpha-acetolactate decarboxylase {ECO:0000313|EMBL:BAG26752.1}; TaxID=334390 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain NBRC 3956 / LMG 18251).;"
L3_072_000G1_scaffold_491_8
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4584..4913)
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Lactobacillus fermentum RepID=R4RGC4_LACFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJY06756.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
L3_072_000G1_scaffold_491_9
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5300..5944
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Lactobacillus fermentum MTCC 8711 RepID=T0TQK4_LACFE
Uncharacterized protein {ECO:0000313|EMBL:KJY06755.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
hypothetical protein
L3_072_000G1_scaffold_491_10
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6103..6564
DNA (462bp) protein (154aa)
Transcriptional regulator n=6 Tax=Lactobacillus fermentum RepID=R4RRM9_LACFE
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ERJ49577.1}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L3_072_000G1_scaffold_491_11
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6557..8308
DNA (1752bp) protein (584aa)
Multidrug ABC transporter ATP-binding and permease components n=1 Tax=Lactobacillus fermentum (strain NBRC 3956 / LMG 18251) RepID=B2GAS3_LACF3
Multidrug ABC transporter ATP-binding and permease components {ECO:0000313|EMBL:BAG26755.1}; TaxID=334390 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain NBRC 3956 / LMG 18251).;"
multidrug ABC transporter ATP-binding and permease components
L3_072_000G1_scaffold_491_12
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8292..10118
DNA (1827bp) protein (609aa)
Multidrug ABC transporter ATP-binding and permease components n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RVA8_LACFE
Multidrug ABC transporter ATP-binding and permease components
Multidrug ABC transporter ATP-binding and permease components {ECO:0000313|EMBL:AGL88369.1}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
L3_072_000G1_scaffold_491_13
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10219..11238
DNA (1020bp) protein (340aa)
Beta-lactamase n=2 Tax=Lactobacillus fermentum RepID=R4RGC9_LACFE
hypothetical protein
Beta-lactamase {ECO:0000313|EMBL:KJY06750.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
L3_072_000G1_scaffold_491_14
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11238..11900
DNA (663bp) protein (221aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
Cardiolipin synthase n=2 Tax=Lactobacillus fermentum RepID=D8IH12_LACFC
cardiolipin synthase
L3_072_000G1_scaffold_491_15
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11897..12724
DNA (828bp) protein (276aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
Cardiolipin synthase n=1 Tax=Lactobacillus fermentum ATCC 14931 RepID=C0WWT7_LACFE
cardiolipin synthase
L3_072_000G1_scaffold_491_16
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13031..13336)
DNA (306bp) protein (102aa)
Uncharacterized protein n=6 Tax=Lactobacillus fermentum RepID=R4RRN6_LACFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ50342.1}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L3_072_000G1_scaffold_491_17
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13348..14079)
DNA (732bp) protein (244aa)
Glutamine amidotransferase domain protein n=4 Tax=Lactobacillus fermentum RepID=R4RVD5_LACFE
Glutamine amidotransferase domain protein
Putative cobyric acid synthase {ECO:0000313|EMBL:BAG26760.1}; TaxID=334390 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain NBRC 3956 / LMG 18251).;"
L3_072_000G1_scaffold_491_18
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14079..15416)
DNA (1338bp) protein (446aa)
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase n=3 Tax=Lactobacillus fermentum RepID=R4RVB4_LACFE
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
UDP-N-acetylmuramyl peptide synthase {ECO:0000313|EMBL:ESS02071.1}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
L3_072_000G1_scaffold_491_19
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15704..16285
DNA (582bp) protein (194aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
Thymidine kinase n=2 Tax=Lactobacillus fermentum RepID=R4RGD3_LACFE
Thymidine kinase
L3_072_000G1_scaffold_491_20
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16285..17373
DNA (1089bp) protein (363aa)
Peptide chain release factor 1 n=1 Tax=Lactobacillus fermentum MTCC 8711 RepID=T0SK28_LACFE
peptide chain release factor 1 (RF-1)
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=712938 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain CECT 5716).;"
L3_072_000G1_scaffold_491_21
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17366..18217
DNA (852bp) protein (284aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
Release factor glutamine methyltransferase n=3 Tax=Lactobacillus fermentum RepID=C0WWU3_LACFE
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
L3_072_000G1_scaffold_491_22
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18236..19267
DNA (1032bp) protein (344aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
Translation factor SUA5 n=3 Tax=Lactobacillus fermentum RepID=R4RVD9_LACFE
hypothetical protein
L3_072_000G1_scaffold_491_23
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19391..20626
DNA (1236bp) protein (412aa)
Serine hydroxymethyltransferase (Serine methylase) (SHMT) (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=712938 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain CECT 5716).;"
Serine hydroxymethyltransferase n=2 Tax=Lactobacillus fermentum RepID=D8IH18_LACFC
L3_072_000G1_scaffold_491_24
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20766..21401
DNA (636bp) protein (212aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
Uracil phosphoribosyltransferase n=6 Tax=Lactobacillus fermentum RepID=UPP_LACF3
upp; uracil phosphoribosyltransferase
L3_072_000G1_scaffold_491_25
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21596..22714
DNA (1119bp) protein (373aa)
YibE/F family protein n=2 Tax=Lactobacillus fermentum RepID=R4RJ52_LACFE
YibE/F family protein
YibE/F family protein {ECO:0000313|EMBL:AGL88381.1}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
L3_072_000G1_scaffold_491_26
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22711..23484
DNA (774bp) protein (258aa)
Multitransmembrane protein n=2 Tax=Lactobacillus fermentum RepID=R4RRP7_LACFE
Multitransmembrane protein
Membrane protein {ECO:0000313|EMBL:KJY06738.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
L3_072_000G1_scaffold_491_27
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23618..24886
DNA (1269bp) protein (423aa)
Uracil transport protein n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RVE3_LACFE
Uracil transport protein
Uracil permease {ECO:0000313|EMBL:KJY06737.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
L3_072_000G1_scaffold_491_28
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25213..25923
DNA (711bp) protein (237aa)
ATP synthase subunit a n=6 Tax=Lactobacillus fermentum RepID=ATP6_LACF3
ATP synthase subunit a
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
L3_072_000G1_scaffold_491_29
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25952..26164
DNA (213bp) protein (71aa)
ATP synthase subunit c n=7 Tax=Lactobacillus fermentum RepID=ATPL_LACF3
ATP synthase subunit c
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1582 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei.;"
L3_072_000G1_scaffold_491_30
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26210..26716
DNA (507bp) protein (169aa)
ATP synthase subunit b n=2 Tax=Lactobacillus fermentum RepID=R4RJ58_LACFE
ATP synthase subunit b
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
Displaying items 1-30 of 52 in total

View Taxonomy