ggKbase home page

L3_072_000G1_scaffold_498

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_498_1

Not on your lists

comp(1..579)
DNA (579bp) protein (193aa)
Transposase, IS4 family protein n=2 Tax=organismal metagenomes RepID=J9CXF7_9ZZZZ
Transposase, IS4 family protein {ECO:0000313|EMBL:EJX04951.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
transposase IS4 family protein
L3_072_000G1_scaffold_498_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(837..3236)
DNA (2400bp) protein (800aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZDK4_9ZZZZ
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY76507.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
TonB-dependent receptor plug
L3_072_000G1_scaffold_498_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3551..4222)
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I9IS58_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY76509.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
cellulase
L3_072_000G1_scaffold_498_4
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4335..5627)
DNA (1293bp) protein (431aa)
Mannan endo-1,4-beta-mannosidase (EC:3.2.1.78)
Uncharacterized protein n=7 Tax=root RepID=A7UYK7_BACUN
Putative carbohydrate-active enzyme {ECO:0000313|EMBL:CDE03481.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
L3_072_000G1_scaffold_498_5
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5719..7002)
DNA (1284bp) protein (428aa)
Acetyl xylan esterase (AXE1) n=6 Tax=root RepID=D2EVR3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY76511.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
Acetyl xylan esterase
L3_072_000G1_scaffold_498_6
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7080..7847)
DNA (768bp) protein (256aa)
AraC family Bacterial regulatory helix-turn-helix protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V816_9BACE
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDO55908.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
AraC family transcriptional regulator
L3_072_000G1_scaffold_498_7
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8146..10590)
DNA (2445bp) protein (815aa)
beta-galactosidase (EC:3.2.1.23)
Glycosyl hydrolase family 2, sugar binding domain protein n=6 Tax=root RepID=D2EVR1_9BACE
Putative carbohydrate-active enzyme {ECO:0000313|EMBL:CDE03485.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
L3_072_000G1_scaffold_498_8
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10813..13299
DNA (2487bp) protein (829aa)
cellobiose phosphorylase (EC:2.4.1.20)
Glycosyltransferase family 36 n=5 Tax=root RepID=D2EVQ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY76514.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L3_072_000G1_scaffold_498_9
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13318..14322
DNA (1005bp) protein (335aa)
Oxidoreductase, aldo/keto reductase family protein n=4 Tax=Bacteroides RepID=A7UYL4_BACUN
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EDO55912.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
aldo/keto reductase
L3_072_000G1_scaffold_498_10
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14329..16344
DNA (2016bp) protein (672aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EVQ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA20747.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
glycoside hydrolase 97
L3_072_000G1_scaffold_498_11
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16536..17174
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=root RepID=R7ELF5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE03500.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_072_000G1_scaffold_498_12
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17298..17927
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=root RepID=R7EM24_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE03501.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_072_000G1_scaffold_498_13
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18035..21076)
DNA (3042bp) protein (1014aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
Glycosyl hydrolase family 3 N terminal domain-containing protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V809_9BACE
glycoside hydrolase 3
L3_072_000G1_scaffold_498_14
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21097..24111)
DNA (3015bp) protein (1005aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HRA2_BACUN
beta-N-acetylglucosaminidase/beta-lactamase fusion protein
L3_072_000G1_scaffold_498_15
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24113..25030)
DNA (918bp) protein (306aa)
Calcineurin-like phosphoesterase n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V807_9BACE
Calcineurin-like phosphoesterase {ECO:0000313|EMBL:EFV27055.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
metallophosphoesterase
L3_072_000G1_scaffold_498_16
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25053..25823)
DNA (771bp) protein (257aa)
5'-nucleotidase, C-terminal domain protein n=6 Tax=root RepID=A7UYM3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE03505.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
5'-nucleotidase
L3_072_000G1_scaffold_498_17
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


26083..26436
DNA (354bp) protein (118aa)
50S ribosomal protein L19 n=8 Tax=root RepID=A7UYM5_BACUN
LSU ribosomal protein L19P
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=483216 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii DSM 20697.;"
L3_072_000G1_scaffold_498_18
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27194..28174)
DNA (981bp) protein (327aa)
ROK family protein n=9 Tax=root RepID=A7UYM8_BACUN
ROK family protein {ECO:0000313|EMBL:EFV27052.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
ROK family protein
L3_072_000G1_scaffold_498_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28351..29067
DNA (717bp) protein (239aa)
ABC transporter, ATP-binding protein n=7 Tax=root RepID=A7UYM9_BACUN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDO55927.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
ABC transporter related protein
L3_072_000G1_scaffold_498_20
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29122..30381
DNA (1260bp) protein (420aa)
Efflux ABC transporter, permease protein n=8 Tax=root RepID=A7UYN0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE03512.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_072_000G1_scaffold_498_21
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30387..31628
DNA (1242bp) protein (414aa)
Efflux ABC transporter, permease protein n=8 Tax=root RepID=A7UYN1_BACUN
ABC transporter permease {ECO:0000313|EMBL:EOS06455.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L3_072_000G1_scaffold_498_22
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31707..32810
DNA (1104bp) protein (368aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Bacteroides RepID=D2EVP5_9BACE
Efflux transporter {ECO:0000313|EMBL:EFV27048.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
efflux transporter, RND family, MFP subunit
L3_072_000G1_scaffold_498_23
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32841..34169
DNA (1329bp) protein (443aa)
Outer membrane efflux protein n=6 Tax=Bacteroides RepID=A7UYN3_BACUN
Outer membrane efflux family protein {ECO:0000313|EMBL:KDS51998.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
outer membrane efflux protein
L3_072_000G1_scaffold_498_24
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34254..35171)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EVP3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA20733.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_072_000G1_scaffold_498_25
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35186..35878)
DNA (693bp) protein (231aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7UYN7_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFA20732.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_072_000G1_scaffold_498_26
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35979..36815)
DNA (837bp) protein (279aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8ZND4_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE03525.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_072_000G1_scaffold_498_27
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37009..38010
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EPV8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE03527.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
Lactate/malate dehydrogenase
L3_072_000G1_scaffold_498_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38453..38962)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64YZ1_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD47285.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_072_000G1_scaffold_498_29
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39482..39955
DNA (474bp) protein (158aa)
Arginine repressor n=7 Tax=Bacteroides RepID=A7UYP9_BACUN
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
ArgR family transcriptional regulator
L3_072_000G1_scaffold_498_30
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39991..40548
DNA (558bp) protein (186aa)
Uncharacterized protein n=8 Tax=root RepID=A7UYQ0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDD99760.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
Displaying items 1-30 of 50 in total

View Taxonomy