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L3_072_000G1_scaffold_501

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_501_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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358..687
DNA (330bp) protein (110aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
UPI0003D6051C related cluster n=1 Tax=unknown RepID=UPI0003D6051C
hisI; phosphoribosyl-AMP cyclohydrolase
L3_072_000G1_scaffold_501_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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736..1065
DNA (330bp) protein (110aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hisE; phosphoribosyl-ATP pyrophosphatase HisE (EC:3.6.1.31)
Phosphoribosyl-ATP pyrophosphatase n=2 Tax=Clostridium butyricum RepID=M8JCQ3_CLOBU
L3_072_000G1_scaffold_501_3
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1224..4400
DNA (3177bp) protein (1059aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U9C3_9CLOT
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKQ53309.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_072_000G1_scaffold_501_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4578..4754
DNA (177bp) protein (59aa)
UPI0003D677D3 related cluster n=1 Tax=unknown RepID=UPI0003D677D3
Uncharacterized protein {ECO:0000313|EMBL:KHD14066.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L3_072_000G1_scaffold_501_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4858..5670
DNA (813bp) protein (271aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JN62_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33427.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_072_000G1_scaffold_501_6
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5771..7057
DNA (1287bp) protein (429aa)
tig; trigger factor Tig (EC:5.2.1.8)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Trigger factor n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MU19_CLOSA
L3_072_000G1_scaffold_501_7
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7216..7818
DNA (603bp) protein (201aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7M2A1_9CLOT
clpP; ATP-dependent Clp protease proteolytic subunit
L3_072_000G1_scaffold_501_8
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7852..9141
DNA (1290bp) protein (430aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Clostridium sp. DL-VIII RepID=G7M2A2_9CLOT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
L3_072_000G1_scaffold_501_9
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9370..11037
DNA (1668bp) protein (556aa)
Sporulation protease LonB {ECO:0000313|EMBL:ABR33509.1}; EC=3.4.21.53 {ECO:0000313|EMBL:ABR33509.1};; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Sporulation protease LonB n=2 Tax=Clostridium RepID=A6LT29_CLOB8
sporulation protease LonB
L3_072_000G1_scaffold_501_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11238..13586
DNA (2349bp) protein (783aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Lon protease n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T1W8_9CLOT
ATP-dependent protease La
L3_072_000G1_scaffold_501_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13576..14172
DNA (597bp) protein (199aa)
Probable GTP-binding protein EngB n=3 Tax=Clostridium butyricum RepID=B1QV15_CLOBU
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
engB; GTP-binding protein EngB
L3_072_000G1_scaffold_501_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14470..14940
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UPL7_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KIL07689.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
L3_072_000G1_scaffold_501_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14976..15269
DNA (294bp) protein (98aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=M8K8G8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33419.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_072_000G1_scaffold_501_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15381..15983
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MX98_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX44082.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_000G1_scaffold_501_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16182..17108)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWR9_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX44081.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_000G1_scaffold_501_16
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17223..17630)
DNA (408bp) protein (136aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LR11_9CLOT
Fe2+/Zn2+ uptake regulation protein
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:AGF55325.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_072_000G1_scaffold_501_17
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18035..18466
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LT37_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJG98084.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L3_072_000G1_scaffold_501_18
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18618..18842
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002D80BFC
Uncharacterized protein {ECO:0000313|EMBL:AJG98085.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L3_072_000G1_scaffold_501_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18905..20389)
DNA (1485bp) protein (495aa)
pncB; nicotinate phosphoribosyltransferase PncB (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Nicotinate phosphoribosyltransferase PncB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWR4_CLOSA
L3_072_000G1_scaffold_501_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20645..22651
DNA (2007bp) protein (669aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ATP-dependent helicase n=2 Tax=Clostridium butyricum RepID=B1QV07_CLOBU
UvrD/REP helicase
L3_072_000G1_scaffold_501_21
unknown

Not on your lists

comp(23060..23593)
DNA (534bp) protein (178aa)

This feature has no annotations

L3_072_000G1_scaffold_501_22
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23826..26006
DNA (2181bp) protein (727aa)
Cell division protein FtsA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K8H9_CLOBU
Actin-like ATPase involved in cell division {ECO:0000313|EMBL:EKQ53167.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
actin-like ATPase involved in cell division
L3_072_000G1_scaffold_501_23
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26210..27391
DNA (1182bp) protein (394aa)
cpsA; thermostable carboxypeptidase 2 (EC:3.4.17.-)
Thermostable carboxypeptidase 2 {ECO:0000313|EMBL:AGX44071.1}; EC=3.4.17.- {ECO:0000313|EMBL:AGX44071.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
peptidase M20 n=1 Tax=Clostridium beijerinckii RepID=UPI0002F2B525
L3_072_000G1_scaffold_501_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27577..28551
DNA (975bp) protein (325aa)
RNA pseudouridine synthase (EC:5.4.99.-)
Pseudouridine synthase, RluA family n=2 Tax=Clostridium butyricum RepID=B1QV02_CLOBU
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:EEP54177.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L3_072_000G1_scaffold_501_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28560..30170
DNA (1611bp) protein (537aa)
Stage V sporulation protein B n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTF9_CLOSA
spoVB3; stage V sporulation protein B
Stage V sporulation protein B {ECO:0000313|EMBL:AGX44069.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_000G1_scaffold_501_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30530..32029)
DNA (1500bp) protein (500aa)
Stage V sporulation protein B n=2 Tax=Clostridium butyricum RepID=M8JN87_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96529.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
spoVB; stage V sporulation protein B
L3_072_000G1_scaffold_501_27
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33015..33200)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUM3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ51096.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_072_000G1_scaffold_501_28
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33401..34699
DNA (1299bp) protein (433aa)
membrane protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002E12A69
Membrane protein {ECO:0000313|EMBL:AJG98099.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
membrane protein
L3_072_000G1_scaffold_501_29
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34902..35456
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T1Z8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ53173.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_072_000G1_scaffold_501_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35431..37104
DNA (1674bp) protein (558aa)
Radical SAM domain protein n=2 Tax=Clostridium butyricum RepID=B1QUZ7_CLOBU
Putative cobalamin-dependent enzyme {ECO:0000313|EMBL:EEP53631.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
radical SAM domain-containing protein
Displaying items 1-30 of 40 in total

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