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L3_072_000G1_scaffold_503

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_503_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..274
DNA (273bp) protein (91aa)
glnA1; Glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase, type I {ECO:0000313|EMBL:ACJ52967.1}; EC=6.3.1.2 {ECO:0000313|EMBL:ACJ52967.1};; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Glutamine synthetase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NFH1_9BIFI
L3_072_000G1_scaffold_503_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(753..1874)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BNF9_BIFBR
ATP-binding Mrp-like protein
Uncharacterized protein {ECO:0000313|EMBL:EPD77001.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_072_000G1_scaffold_503_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2130..4919)
DNA (2790bp) protein (930aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
DNA ligase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C9G3_BIFBR
ligA; NAD-dependent DNA ligase
L3_072_000G1_scaffold_503_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4958..8329)
DNA (3372bp) protein (1124aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AKW8_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76999.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Hypothetical protein
L3_072_000G1_scaffold_503_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8479..10629
DNA (2151bp) protein (717aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNF6_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE89193.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
putative membrane spanning protein
L3_072_000G1_scaffold_503_6
unknown

Not on your lists

comp(10616..10750)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_072_000G1_scaffold_503_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10762..10941
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A437_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76997.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Hypothetical protein
L3_072_000G1_scaffold_503_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11024..11818)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZKT7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76996.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
ATP-binding protein of ABC transporter system
L3_072_000G1_scaffold_503_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11818..13029)
DNA (1212bp) protein (404aa)
class I/II aminotransferase (EC:2.6.1.-)
Aminotransferase, class I/II {ECO:0000313|EMBL:AEF26754.1}; EC=2.6.1.- {ECO:0000313|EMBL:AEF26754.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Aminotransferase, class I/II n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C558_BIFBA
L3_072_000G1_scaffold_503_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13289..14356
DNA (1068bp) protein (356aa)
NMT1/THI5-like protein n=3 Tax=Bifidobacterium breve RepID=U2CRH1_BIFBR
Solute binding protein of ABC transporter system
Uncharacterized protein {ECO:0000313|EMBL:EPD76994.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_072_000G1_scaffold_503_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14424..15200
DNA (777bp) protein (259aa)
ABC transporter, permease protein n=4 Tax=Bifidobacterium breve RepID=F6C560_BIFBA
Permease protein of ABC transporter system
Uncharacterized protein {ECO:0000313|EMBL:EPD76993.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_072_000G1_scaffold_503_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15320..16114)
DNA (795bp) protein (265aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Isoprenyl transferase n=5 Tax=Bifidobacterium breve RepID=F9XY27_BIFBU
Undecaprenyl pyrophosphate synthetase
L3_072_000G1_scaffold_503_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16111..16830)
DNA (720bp) protein (240aa)
DNA repair protein RecO n=5 Tax=Bifidobacterium breve RepID=F6C562_BIFBA
DNA repair protein recO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_072_000G1_scaffold_503_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16863..18611)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZRN8_BIFBR
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ20840.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
putative membrane spanning protein
L3_072_000G1_scaffold_503_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18686..19909)
DNA (1224bp) protein (408aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=5 Tax=Bifidobacterium breve RepID=F6C564_BIFBA
L3_072_000G1_scaffold_503_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19906..21096)
DNA (1191bp) protein (397aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E438_BIFBR
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L3_072_000G1_scaffold_503_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21093..22691)
DNA (1599bp) protein (533aa)
DivIVA domain repeat protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C566_BIFBA
DivIVA domain repeat protein {ECO:0000313|EMBL:AEF27018.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
DivIVA domain repeat-containing protein
L3_072_000G1_scaffold_503_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23016..23432)
DNA (417bp) protein (139aa)
Uncharacterized protein n=6 Tax=Bifidobacterium breve RepID=F6C567_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF28043.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_072_000G1_scaffold_503_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23524..24534)
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XY20_BIFBU
Conserved hypothetical protein, contains Lon protease motif
Uncharacterized protein {ECO:0000313|EMBL:ABE95345.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_072_000G1_scaffold_503_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24615..26345
DNA (1731bp) protein (577aa)
hydrolase n=1 Tax=Bifidobacterium breve RepID=UPI0002F672A9
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ20834.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_072_000G1_scaffold_503_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26416..27963)
DNA (1548bp) protein (516aa)
UvrD/REP helicase (EC:3.6.1.-)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
UvrD/REP helicase n=2 Tax=Bifidobacterium breve RepID=F6C570_BIFBA
L3_072_000G1_scaffold_503_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28046..29677
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DZH0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87137.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
phosphotransferase enzyme domain protein
L3_072_000G1_scaffold_503_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29783..30007
DNA (225bp) protein (75aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=D4BND9_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ20831.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_072_000G1_scaffold_503_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30064..30957)
DNA (894bp) protein (298aa)
PHP domain containing protein (TRPH) n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XY15_BIFBU
PHP domain containing protein (TRPH)
PHP domain containing protein (TRPH) {ECO:0000313|EMBL:AHJ20830.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_072_000G1_scaffold_503_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31084..31803
DNA (720bp) protein (240aa)
Vitamin K epoxide reductase family n=3 Tax=Bifidobacterium breve RepID=F6C574_BIFBA
putative membrane spanning protein, contains a vitamin K epoxide reductase domain
Vitamin K epoxide reductase family {ECO:0000313|EMBL:AEF26895.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_072_000G1_scaffold_503_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31872..32771)
DNA (900bp) protein (300aa)
dapF; Diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Diaminopimelate epimerase n=2 Tax=Bifidobacterium breve RepID=F9XXT6_BIFBU
L3_072_000G1_scaffold_503_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32902..33696
DNA (795bp) protein (265aa)
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Glutamate racemase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C576_BIFBA
L3_072_000G1_scaffold_503_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33823..34668
DNA (846bp) protein (282aa)
Phospholipase, patatin family n=3 Tax=Bifidobacterium breve RepID=F6C577_BIFBA
Phospholipase
Phospholipase {ECO:0000313|EMBL:AHJ20826.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_072_000G1_scaffold_503_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34731..34913)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C9I8_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76975.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Hypothetical protein, ATPase
L3_072_000G1_scaffold_503_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34934..35167)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZRM0_BIFBR
Hypothetical protein, ATPase
Uncharacterized protein {ECO:0000313|EMBL:EPD76975.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Displaying items 1-30 of 41 in total

View Taxonomy