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L3_072_000G1_scaffold_508

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_508_1
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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23..1213
DNA (1191bp) protein (397aa)
Elongation factor Tu n=51 Tax=Lactobacillus casei group RepID=EFTU_LACC3
translation elongation factor
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L3_072_000G1_scaffold_508_2
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1667..3403
DNA (1737bp) protein (579aa)
Lipid A export ATP-binding/permease protein n=3 Tax=Lactobacillus casei group RepID=K6S306_LACCA
Multidrug ABC transporter, ATPase and permease {ECO:0000313|EMBL:EPC39286.1}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
yknV; ABC transporter ATP-binding protein YknV
L3_072_000G1_scaffold_508_3
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3594..4931
DNA (1338bp) protein (446aa)
Trigger factor {ECO:0000255|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000255|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000255|HAMAP-Rule:MF_00303};; PPIase {ECO:0000255|HAMAP-Rule:MF_00303}; TaxID=543734 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain BL23).;"
Trigger factor n=22 Tax=Lactobacillus casei group RepID=TIG_LACC3
tig; trigger factor
L3_072_000G1_scaffold_508_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5126..6376
DNA (1251bp) protein (417aa)
Clp protease ATP-binding subunit (EC:3.6.1.3)
ATP-dependent Clp protease ATP-binding subunit ClpX n=55 Tax=Lactobacillus casei group RepID=B3WE41_LACCB
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1435040 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 1981.;"
L3_072_000G1_scaffold_508_5
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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6595..7191
DNA (597bp) protein (199aa)
Probable GTP-binding protein EngB n=38 Tax=Lactobacillus casei group RepID=ENGB_LACC3
GTP-binding protein EngB
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L3_072_000G1_scaffold_508_6
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7195..7485
DNA (291bp) protein (97aa)
MazG nucleotide pyrophosphohydrolase n=52 Tax=Lactobacillus casei group RepID=B3WE43_LACCB
Hypothetical protein
Putative pyrophosphatase {ECO:0000313|EMBL:EPC90863.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L3_072_000G1_scaffold_508_7
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7529..7690)
DNA (162bp) protein (54aa)
Uncharacterized protein n=47 Tax=Lactobacillus casei group RepID=F2MLP0_LACCD
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKQ12379.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
L3_072_000G1_scaffold_508_8
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7845..9302
DNA (1458bp) protein (486aa)
Amino acid ABC transporter, substrate-binding and permease n=5 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2L8Y0_LACPA
Inner membrane amino-acid ABC transporter permease protein yecS {ECO:0000313|EMBL:EPC50296.1}; TaxID=1256201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp123.;"
gnlP; amino acid ABC transporter substrate-binding protein/permease
L3_072_000G1_scaffold_508_9
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9292..10038
DNA (747bp) protein (249aa)
Glutamine ABC transporter n=37 Tax=Lactobacillus casei group RepID=C5F5S9_LACPA
glutamine ABC transporter
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEI67284.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L3_072_000G1_scaffold_508_10
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10215..12023
DNA (1809bp) protein (603aa)
UvrABC system protein C n=25 Tax=Lactobacillus casei group RepID=C5F5S8_LACPA
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
Excinuclease ABC subunit C
L3_072_000G1_scaffold_508_11
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(12398..14368)
DNA (1971bp) protein (657aa)
Fructose-specific phosphotransferase system, enzyme IIABC n=23 Tax=Lactobacillus casei group RepID=B3WE49_LACCB
Fructose-specific phosphotransferase system, enzyme IIABC {ECO:0000313|EMBL:GAN42599.1}; TaxID=1435040 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 1981.;"
Putative fructose-specific phosphotransferase system (PTS), IIABC component
L3_072_000G1_scaffold_508_12
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14378..15292)
DNA (915bp) protein (305aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
Tagatose-6-phosphate kinase n=45 Tax=Lactobacillus casei group RepID=B3WE50_LACCB
Tagatose-6-phosphate kinase
L3_072_000G1_scaffold_508_13
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15289..16038)
DNA (750bp) protein (250aa)
Transcription regulator of fructose operon n=42 Tax=Lactobacillus casei group RepID=B3WE51_LACCB
lactose transport regulator
DeoR family transcriptional regulator {ECO:0000313|EMBL:GAN36830.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L3_072_000G1_scaffold_508_14
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16287..17573
DNA (1287bp) protein (429aa)
GTPase Obg n=36 Tax=Lactobacillus casei group RepID=OBG_LACC3
GTP-binding protein Obg
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L3_072_000G1_scaffold_508_15
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17613..19607
DNA (1995bp) protein (665aa)
Acyltransferase {ECO:0000313|EMBL:EKQ10529.1}; EC=2.3.1.- {ECO:0000313|EMBL:EKQ10529.1};; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
Uncharacterized protein n=27 Tax=Lactobacillus casei group RepID=F2M473_LACCC
hypothetical protein
L3_072_000G1_scaffold_508_16
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19836..20798
DNA (963bp) protein (321aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1051652 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 32G.;"
Ribonuclease Z n=28 Tax=Lactobacillus casei group RepID=RNZ_LACC3
beta-lactamase superfamily metal-dependent hydrolase
L3_072_000G1_scaffold_508_17
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20842..21627
DNA (786bp) protein (262aa)
Ketoacyl reductase n=32 Tax=Lactobacillus casei group RepID=F2MLQ1_LACCD
Ketoacyl reductase
Short-chain dehydrogenase {ECO:0000313|EMBL:EPC39271.1}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
L3_072_000G1_scaffold_508_18
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21641..21976
DNA (336bp) protein (112aa)
Uncharacterized integral membrane protein n=37 Tax=Lactobacillus casei group RepID=B3WE56_LACCB
Hypothetical protein
Membrane protein {ECO:0000313|EMBL:ERN49871.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L3_072_000G1_scaffold_508_19
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22333..24939
DNA (2607bp) protein (869aa)
Chaperone ClpB n=26 Tax=Lactobacillus casei group RepID=C5F5R8_LACPA
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=537973 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei 8700:2.;"
chaperone ClpB
L3_072_000G1_scaffold_508_20
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


25120..25311
DNA (192bp) protein (64aa)
50S ribosomal protein L32 n=51 Tax=Lactobacillus casei group RepID=RL32_LACC3
rpmF; 50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
L3_072_000G1_scaffold_508_21
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25668..26219
DNA (552bp) protein (184aa)
BS_ykrK family protein n=46 Tax=Lactobacillus casei group RepID=B3WE59_LACCB
hypothetical protein
BS_ykrK family protein {ECO:0000313|EMBL:GAN36839.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L3_072_000G1_scaffold_508_22
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26216..27769
DNA (1554bp) protein (518aa)
2',3'-cyclic-nucleotide 2'-phosphodiesterase {ECO:0000313|EMBL:EKQ03227.1}; EC=3.-.-.- {ECO:0000313|EMBL:EKQ03227.1};; EC=3.1.4.16 {ECO:0000313|EMBL:EKQ03227.1};; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
2,3-cyclic-nucleotide 2-phosphodiesterase n=20 Tax=Lactobacillus casei group RepID=C5F5R4_LACPA
2',3'-cyclic-nucleotide 2'-phosphodiesterase
L3_072_000G1_scaffold_508_23
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27812..28723
DNA (912bp) protein (304aa)
Uncharacterized protein n=25 Tax=Lactobacillus casei group RepID=C5F5R3_LACPA
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EPC15881.1}; TaxID=1256230 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. tolerans Lpl7.;"
L3_072_000G1_scaffold_508_24
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28831..29025)
DNA (195bp) protein (65aa)
Uncharacterized protein n=42 Tax=Lactobacillus casei group RepID=C5F5R2_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC86292.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_072_000G1_scaffold_508_25
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29121..32417
DNA (3297bp) protein (1099aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
DNA polymerase III alpha subunit n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2MAK2_LACPA
DNA polymerase III subunit epsilon
L3_072_000G1_scaffold_508_26
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32529..33488
DNA (960bp) protein (320aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=537973 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei 8700:2.;"
6-phosphofructokinase n=56 Tax=Lactobacillus casei group RepID=K6PF_LACC3
6-phosphofructokinase
L3_072_000G1_scaffold_508_27
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33547..35313
DNA (1767bp) protein (589aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
Pyruvate kinase n=44 Tax=Lactobacillus casei group RepID=B3WE65_LACCB
pykA; Pyruvate kinase
L3_072_000G1_scaffold_508_28
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

35537..35998
DNA (462bp) protein (154aa)
UPF0756 membrane protein LSEI_1366 n=42 Tax=Lactobacillus casei group RepID=Y1366_LACC3
hypothetical protein
UPF0756 membrane protein Lpp7_08082 {ECO:0000256|HAMAP-Rule:MF_01874}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
L3_072_000G1_scaffold_508_29
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

36038..36916
DNA (879bp) protein (293aa)
RNA-binding protein n=41 Tax=Lactobacillus casei group RepID=C5F5Q7_LACPA
S1 RNA binding protein
RNA-binding protein, S1-like domain {ECO:0000313|EMBL:EPC86297.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_072_000G1_scaffold_508_30
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

36921..37802
DNA (882bp) protein (294aa)
Tyrosine recombinase XerD n=44 Tax=Lactobacillus casei group RepID=B3WE68_LACCB
Tyrosine recombinase XerD
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
Displaying items 1-30 of 40 in total

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