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L3_072_000G1_scaffold_525

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_525_1
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..600)
DNA (600bp) protein (200aa)
RNA-directed DNA polymerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JC59_CLOBU
Retron-type reverse transcriptase {ECO:0000313|EMBL:AJH01818.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
retron-type reverse transcriptase
L3_072_000G1_scaffold_525_2
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1132..1305)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2N343_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK29922.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
L3_072_000G1_scaffold_525_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1374..2018)
DNA (645bp) protein (215aa)
Ribonuclease HI n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBQ9_9CLOT
Ribonuclease HI {ECO:0000313|EMBL:EKY25125.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ribonuclease H-related protein
L3_072_000G1_scaffold_525_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2033..2986)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3D4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31023.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_072_000G1_scaffold_525_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3167..4945
DNA (1779bp) protein (593aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ftsH3; ATP-dependent zinc metalloprotease FtsH 1 (EC:3.4.24.-)
ATP-dependent metallopeptidase HflB n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGG8_9CLOT
L3_072_000G1_scaffold_525_6
unknown

Not on your lists

comp(5267..5716)
DNA (450bp) protein (150aa)

This feature has no annotations

L3_072_000G1_scaffold_525_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5726..6589)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY25117.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_072_000G1_scaffold_525_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6582..7076)
DNA (495bp) protein (165aa)
Putative RNA polymerase sigma factor SigV n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAY4_9CLOT
Putative RNA polymerase sigma factor SigV {ECO:0000313|EMBL:EKY25116.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_072_000G1_scaffold_525_9
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7369..8523
DNA (1155bp) protein (385aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M1I7_9CLOT
amino acid/amide ABC transporter substrate-binding protein, HAAT family
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:AGF59480.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_072_000G1_scaffold_525_10
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8553..9428
DNA (876bp) protein (292aa)
Inner-membrane translocator n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SUP1_CLOC7
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADL50946.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_072_000G1_scaffold_525_11
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9438..10409
DNA (972bp) protein (324aa)
Inner-membrane translocator n=2 Tax=Clostridium cellulovorans RepID=D9SUP0_CLOC7
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADL50945.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_072_000G1_scaffold_525_12
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10413..11171
DNA (759bp) protein (253aa)
Sulfate-transporting ATPase {ECO:0000313|EMBL:EHI96874.1}; EC=3.6.3.25 {ECO:0000313|EMBL:EHI96874.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Sulfate-transporting ATPase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAW6_9CLOT
ABC transporter
L3_072_000G1_scaffold_525_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11173..11874
DNA (702bp) protein (234aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAU5_9CLOT
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EKQ55919.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
ABC transporter related protein
L3_072_000G1_scaffold_525_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11930..12634)
DNA (705bp) protein (235aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H448_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99111.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_072_000G1_scaffold_525_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12789..13607)
DNA (819bp) protein (273aa)
methionine ABC transporter substrate-binding protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002E37724
YaeC family lipoprotein
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_072_000G1_scaffold_525_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13627..14265)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4Z1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99115.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
metI; D-methionine transport system permease protein MetI
L3_072_000G1_scaffold_525_17
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14267..15229)
DNA (963bp) protein (321aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
ABC-type metal ion transport system, ATPase component n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U2W9_9CLOT
ABC transporter related protein
L3_072_000G1_scaffold_525_18
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15528..16028)
DNA (501bp) protein (167aa)
Putative Acetyltransferase, GNAT family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F1F9_9CLOT
Putative Acetyltransferase, GNAT family {ECO:0000313|EMBL:CDG02411.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
GNAT family acetyltransferase
L3_072_000G1_scaffold_525_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16151..16372)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LW65_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU70462.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_072_000G1_scaffold_525_20
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16459..17790)
DNA (1332bp) protein (444aa)
Putative MATE efflux family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EMI2_9CLOT
Putative MATE efflux family protein {ECO:0000313|EMBL:CDG02412.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L3_072_000G1_scaffold_525_21
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17741..18637)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI00036264D5
transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AIF54124.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
L3_072_000G1_scaffold_525_22
Methanoculleus sp. CAG:1088, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18696..19442)
DNA (747bp) protein (249aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
7-alpha-hydroxysteroid dehydrogenase n=1 Tax=Methanoculleus sp. CAG:1088 RepID=R7Q0J0_9EURY
7-alpha-hydroxysteroid dehydrogenase {ECO:0000313|EMBL:CDF30342.1}; TaxID=1262903 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus; environmental samples.;" source="Methanoculleus sp. CAG:1088.;"
L3_072_000G1_scaffold_525_23
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19604..20098
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U710_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ57756.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_072_000G1_scaffold_525_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20161..22224)
DNA (2064bp) protein (688aa)
Sensory transduction protein kinase n=2 Tax=Clostridium botulinum B RepID=B2TKZ6_CLOBB
sensory transduction protein kinase
Sensory transduction protein kinase {ECO:0000313|EMBL:ACD23590.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_072_000G1_scaffold_525_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22190..22891)
DNA (702bp) protein (234aa)
PhoB family transcriptional regulator n=1 Tax=Clostridium botulinum RepID=UPI0003170444
Response regulator {ECO:0000313|EMBL:AIY81168.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
regulatory protein VanR
L3_072_000G1_scaffold_525_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23064..23588)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN73_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96026.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L3_072_000G1_scaffold_525_27
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23611..24204)
DNA (594bp) protein (198aa)
Thiol-disulfide isomerase-like thioredoxin n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MGM9_9CLOT
thiol-disulfide isomerase-like thioredoxin
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:AGF55503.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_072_000G1_scaffold_525_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24264..25571)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0002D4BA3F
CBS/transporter domain-containing protein
CBS/transporter domain protein {ECO:0000313|EMBL:EES47731.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L3_072_000G1_scaffold_525_29
unknown

Not on your lists

26187..26753
DNA (567bp) protein (189aa)

This feature has no annotations

L3_072_000G1_scaffold_525_30
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26959..28299
DNA (1341bp) protein (447aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Turicibacter sp. HGF1 RepID=F0HEZ3_9FIRM
Transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein {ECO:0000313|EMBL:EFF63434.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein
Displaying items 1-30 of 42 in total

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