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L3_072_000G1_scaffold_527

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_527_1
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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40..459
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JK37_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ84452.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_072_000G1_scaffold_527_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

452..874
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2C695_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI62891.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
phage protein
L3_072_000G1_scaffold_527_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

879..1073
DNA (195bp) protein (65aa)
Putative phage protein n=2 Tax=Clostridium difficile RepID=T2YQJ3_CLODI
Putative phage protein {ECO:0000313|EMBL:EQE68004.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_000G1_scaffold_527_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1074..2375
DNA (1302bp) protein (434aa)
Phage tail sheath family protein n=9 Tax=Clostridium difficile RepID=T2ZW62_CLODI
Putative phage protein {ECO:0000313|EMBL:CCL00901.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
phage protein
L3_072_000G1_scaffold_527_5
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2393..2866
DNA (474bp) protein (158aa)
XkdM protein, phage-like element PBSX n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JK33_CELLD
XkdM protein, phage-like element PBSX
XkdM protein, phage-like element PBSX {ECO:0000313|EMBL:ADZ84448.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_072_000G1_scaffold_527_6
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2949..3377
DNA (429bp) protein (143aa)
Phage XkdN-like protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FG63_9CLOT
Phage XkdN-like protein {ECO:0000313|EMBL:EMS70270.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
XkdN-like protein
L3_072_000G1_scaffold_527_7
unknown

Not on your lists

3434..3574
DNA (141bp) protein (47aa)

This feature has no annotations

L3_072_000G1_scaffold_527_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3583..5955
DNA (2373bp) protein (791aa)
Tape measure domain protein n=10 Tax=Clostridium difficile RepID=T3I2M9_CLODI
Putative phage tail tape measure protein {ECO:0000313|EMBL:CDT82643.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
tail tape measure protein
L3_072_000G1_scaffold_527_9
Candidatus Arthromitus sp. SFB-mouse, Candidatus Arthromitus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5971..6693
DNA (723bp) protein (241aa)
Uncharacterized protein n=8 Tax=Candidatus Arthromitus RepID=F9VIV2_ARTSS
LysM domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:BAK55912.1}; TaxID=1029718 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Candidatus Arthromitus.;" source="Arthromitus sp. (strain SFB-mouse-Japan).;"
L3_072_000G1_scaffold_527_10
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6699..7661
DNA (963bp) protein (321aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R7FI36_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE15004.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
phage cell wall hydrolase
L3_072_000G1_scaffold_527_11
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7654..8148
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:356 RepID=R6Z0S6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37169.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
hypothetical protein
L3_072_000G1_scaffold_527_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8164..8571
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium difficile DA00196 RepID=T3TCJ0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ27744.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
hypothetical protein
L3_072_000G1_scaffold_527_13
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8571..9656
DNA (1086bp) protein (362aa)
Phage tail protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R3R1_9CLOT
Phage tail protein {ECO:0000313|EMBL:EPR12308.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
baseplate J family protein
L3_072_000G1_scaffold_527_14
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9646..10101
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DPM1_DESRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG59598.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
L3_072_000G1_scaffold_527_15
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10122..10328
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P4I5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ04606.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L3_072_000G1_scaffold_527_16
unknown

Not on your lists

10340..10597
DNA (258bp) protein (86aa)

This feature has no annotations

L3_072_000G1_scaffold_527_17
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10639..11550
DNA (912bp) protein (304aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 2_2_44A RepID=G1VS86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73818.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
L3_072_000G1_scaffold_527_18
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12037..12243
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z786_BELBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL85104.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
L3_072_000G1_scaffold_527_19
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12215..12751
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium LA4B-2 RepID=S4EPJ4_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EPI19394.1}; TaxID=1244150 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium LA4B-2.;"
hypothetical protein
L3_072_000G1_scaffold_527_20
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13301..13477
DNA (177bp) protein (59aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RHJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93928.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Ferredoxin
L3_072_000G1_scaffold_527_21
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13563..13805)
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9QZ87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92740.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_072_000G1_scaffold_527_22
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14193..15302)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QX55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93868.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Phage integrase family.
L3_072_000G1_scaffold_527_23
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15452..16930)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N8N4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18172.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_072_000G1_scaffold_527_24
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16951..17226)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N8N3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18171.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_072_000G1_scaffold_527_25
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17231..17623)
DNA (393bp) protein (131aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N8N2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDS18170.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
XRE family transcriptional regulator
L3_072_000G1_scaffold_527_26
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17773..17988
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JQG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35473.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
L3_072_000G1_scaffold_527_27
unknown

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18056..18235
DNA (180bp) protein (60aa)

This feature has no annotations

L3_072_000G1_scaffold_527_28
unknown

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18183..18452
DNA (270bp) protein (90aa)

This feature has no annotations

L3_072_000G1_scaffold_527_29
unknown

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comp(18433..18609)
DNA (177bp) protein (59aa)

This feature has no annotations

L3_072_000G1_scaffold_527_30
unknown

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18675..18812
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying items 1-30 of 71 in total

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