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L3_072_000G1_scaffold_541

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_541_1
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(249..1127)
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus fermentum (strain NBRC 3956 / LMG 18251) RepID=B2GET6_LACF3
Uncharacterized protein {ECO:0000313|EMBL:EEI22787.1}; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
hypothetical protein
L3_072_000G1_scaffold_541_2
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1133..1747)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RKP3_LACFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL89910.1}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
L3_072_000G1_scaffold_541_3
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1892..3697)
DNA (1806bp) protein (602aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
Threonine--tRNA ligase n=1 Tax=Lactobacillus fermentum ATCC 14931 RepID=C0WVS1_LACFE
Threonyl-tRNA synthetase
L3_072_000G1_scaffold_541_4
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3946..4170)
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Lactobacillus fermentum RepID=U2IMR0_LACFE
Uncharacterized protein {ECO:0000313|EMBL:EQC60343.1}; TaxID=1366052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum MTCC 8711.;"
L3_072_000G1_scaffold_541_5
unknown

Not on your lists

4347..4700
DNA (354bp) protein (118aa)

This feature has no annotations

L3_072_000G1_scaffold_541_6
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5152..6714)
DNA (1563bp) protein (521aa)
NRAMP family manganese (Mn2+) transporter n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RVL7_LACFE
NRAMP family manganese (Mn2+) transporter
NRAMP family manganese (Mn2+) transporter {ECO:0000313|EMBL:AGL89907.1}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
L3_072_000G1_scaffold_541_7
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7011..8021
DNA (1011bp) protein (337aa)
Putative chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:EEI22782.1}; EC=1.1.1.103 {ECO:0000313|EMBL:EEI22782.1};; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
Dehydrogenase n=3 Tax=Lactobacillus fermentum RepID=B2GET1_LACF3
dehydrogenase
L3_072_000G1_scaffold_541_8
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8704..9765
DNA (1062bp) protein (354aa)
Efflux ABC transporter, permease protein n=1 Tax=Lactobacillus fermentum ATCC 14931 RepID=C0WVR6_LACFE
ABC transporter permease {ECO:0000313|EMBL:KJY07586.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
ABC transporter permease
L3_072_000G1_scaffold_541_9
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9778..10470
DNA (693bp) protein (231aa)
ABC transporter ATP-binding component n=4 Tax=Lactobacillus fermentum RepID=R4RZJ3_LACFE
ABC transporter ATP-binding component
ABC transporter ATP-binding component {ECO:0000313|EMBL:CDI68260.1}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
L3_072_000G1_scaffold_541_10
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10632..11090
DNA (459bp) protein (153aa)
Arginine repressor n=6 Tax=Lactobacillus fermentum RepID=B2GES7_LACF3
Arginine repressor
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L3_072_000G1_scaffold_541_11
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11272..11574)
DNA (303bp) protein (101aa)
Transcriptional regulator n=5 Tax=Lactobacillus fermentum RepID=B2GES5_LACF3
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CDI69430.1}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
L3_072_000G1_scaffold_541_12
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11711..13774)
DNA (2064bp) protein (688aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase n=1 Tax=Lactobacillus fermentum NB-22 RepID=V4XQJ1_LACFE
Uncharacterized protein {ECO:0000313|EMBL:CDI69429.1}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
hypothetical protein
L3_072_000G1_scaffold_541_13
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14204..15151
DNA (948bp) protein (316aa)
LacI family transcriptional regulator n=3 Tax=Lactobacillus fermentum RepID=D8IJ88_LACFC
LacI family transcriptional regulator
Sucrose operon repressor {ECO:0000313|EMBL:CDI69428.1}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
L3_072_000G1_scaffold_541_14
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15198..15389)
DNA (192bp) protein (64aa)
Uncharacterized protein n=8 Tax=Lactobacillus fermentum RepID=R4RN82_LACFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ52419.2}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L3_072_000G1_scaffold_541_15
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15568..16200
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Lactobacillus fermentum NB-22 RepID=V4XK25_LACFE
Uncharacterized protein {ECO:0000313|EMBL:ERJ52420.3}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
hypothetical protein
L3_072_000G1_scaffold_541_16
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16347..16904
DNA (558bp) protein (186aa)
Elongation factor P n=7 Tax=Lactobacillus fermentum RepID=EFP_LACF3
elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1366052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum MTCC 8711.;"
L3_072_000G1_scaffold_541_17
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17085..17711)
DNA (627bp) protein (209aa)
NAD(P)H-hydrate epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; EC=5.1.99.6 {ECO:0000256|HAMAP-Rule:MF_01966};; NAD(P)HX epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
NAD(P)H-hydrate epimerase n=4 Tax=Lactobacillus fermentum RepID=C0WVQ7_LACFE
hypothetical protein
L3_072_000G1_scaffold_541_18
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17805..18128
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DS81_LACFE
Uncharacterized protein {ECO:0000313|EMBL:KJY07596.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
hypothetical protein
L3_072_000G1_scaffold_541_19
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18131..18805
DNA (675bp) protein (225aa)
NAD(P)H oxidoreductase n=6 Tax=Lactobacillus fermentum RepID=B2GER7_LACF3
NAD(P)H oxidoreductase
NAD(P)H oxidoreductase {ECO:0000313|EMBL:KJY07597.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
L3_072_000G1_scaffold_541_20
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18806..18991
DNA (186bp) protein (62aa)
Uncharacterized protein n=5 Tax=Lactobacillus fermentum RepID=R4RKM7_LACFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ54558.1}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L3_072_000G1_scaffold_541_21
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19162..19527)
DNA (366bp) protein (122aa)
Uncharacterized protein n=7 Tax=Lactobacillus fermentum RepID=R4RZD6_LACFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ54557.2}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L3_072_000G1_scaffold_541_22
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19590..20219
DNA (630bp) protein (210aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
3-methyladenine DNA glycosylase n=4 Tax=Lactobacillus fermentum RepID=D8IJ86_LACFC
putative DNA-3-methyladenine glycosylase II
L3_072_000G1_scaffold_541_23
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20221..21363
DNA (1143bp) protein (381aa)
ATPase n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RVJ7_LACFE
ATPase
ATPase {ECO:0000313|EMBL:KJY07601.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
L3_072_000G1_scaffold_541_24
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21317..22516
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Lactobacillus fermentum NB-22 RepID=V4ZJ45_LACFE
Uncharacterized protein {ECO:0000313|EMBL:ESS02275.1}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
hypothetical protein
L3_072_000G1_scaffold_541_25
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22518..22802
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Lactobacillus fermentum RepID=R4RKM3_LACFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJY07603.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
L3_072_000G1_scaffold_541_26
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22899..24209
DNA (1311bp) protein (437aa)
Putative permease n=1 Tax=Lactobacillus fermentum ATCC 14931 RepID=C0WVP8_LACFE
Putative permease {ECO:0000313|EMBL:EEI22872.1}; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
Transport protein
L3_072_000G1_scaffold_541_27
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24469..26373
DNA (1905bp) protein (635aa)
Peptidase family M13 n=2 Tax=Lactobacillus fermentum RepID=C0WVP7_LACFE
Peptidase M13 {ECO:0000313|EMBL:KIL02104.1}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
M13 family peptidase
L3_072_000G1_scaffold_541_28
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26382..26891
DNA (510bp) protein (170aa)
Appr-1-p processing domain protein n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RVJ4_LACFE
Appr-1-p processing domain protein
Appr-1-p processing domain protein {ECO:0000313|EMBL:AGL89882.1}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
L3_072_000G1_scaffold_541_29
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26998..27792)
DNA (795bp) protein (265aa)
Nicotinamide mononucleotide transporter n=4 Tax=Lactobacillus fermentum RepID=R4RN66_LACFE
Nicotinamide mononucleotide transporter
Putative uncharacterized protein {ECO:0000313|EMBL:BAG28139.1}; TaxID=334390 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain NBRC 3956 / LMG 18251).;"
L3_072_000G1_scaffold_541_30
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28009..28467)
DNA (459bp) protein (153aa)
Transcription elongation factor GreA n=4 Tax=Lactobacillus fermentum RepID=R4RKL6_LACFE
greA; Transcription elongation factor
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
Displaying items 1-30 of 44 in total

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