ggKbase home page

L3_072_000G1_scaffold_542

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_542_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..285)
DNA (285bp) protein (95aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
gap; Glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCS8_9CLOT
L3_072_000G1_scaffold_542_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(332..1375)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF55_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97027.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sugar-binding domain-containing protein
L3_072_000G1_scaffold_542_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1734..3116)
DNA (1383bp) protein (461aa)
RNA polymerase sigma-54 factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6T4_9CLOT
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EEH97026.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rpoN; RNA polymerase sigma-54 factor
L3_072_000G1_scaffold_542_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3231..4283)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1Z6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97025.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
basic membrane family protein
L3_072_000G1_scaffold_542_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4516..5352)
DNA (837bp) protein (279aa)
DegV family EDD domain-containing protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2T3_9CLOT
DegV family EDD domain-containing protein {ECO:0000313|EMBL:EEH97024.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
DegV domain-containing protein
L3_072_000G1_scaffold_542_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5369..5830)
DNA (462bp) protein (154aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
RNA methyltransferase, TrmH family, group 2 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCS4_9CLOT
spoU rRNA Methylase family protein
L3_072_000G1_scaffold_542_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6129..6965)
DNA (837bp) protein (279aa)
phosphoglycolate phosphatase,-type (EC:3.1.3.18)
Cof-like hydrolase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF52_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:EEH97022.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_072_000G1_scaffold_542_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7119..8579)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6T2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97021.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative vancomycin resistance protein
L3_072_000G1_scaffold_542_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8880..9821)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1Z5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97020.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
glycoside hydrolase
L3_072_000G1_scaffold_542_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9890..11449)
DNA (1560bp) protein (520aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2T2_9CLOT
integral membrane sensor signal transduction histidine kinase
L3_072_000G1_scaffold_542_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11439..12152)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCS0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97018.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
regulatory protein VanR
L3_072_000G1_scaffold_542_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12689..13774
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF50_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97017.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative transposase
L3_072_000G1_scaffold_542_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14231..17128)
DNA (2898bp) protein (966aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6T0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97016.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
peptidase, M56 family protein
L3_072_000G1_scaffold_542_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17128..17514)
DNA (387bp) protein (129aa)
CopY/TcrY family copper transport repressor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1Z4_9CLOT
CopY/TcrY family copper transport repressor {ECO:0000313|EMBL:EEH97015.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
penicillinase repressor
L3_072_000G1_scaffold_542_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17914..20013)
DNA (2100bp) protein (700aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
V-type H(+)-translocating pyrophosphatase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2T0_9CLOT
L3_072_000G1_scaffold_542_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20363..21262)
DNA (900bp) protein (300aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine-D-alanine ligase B n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCR7_9CLOT
L3_072_000G1_scaffold_542_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21834..22484)
DNA (651bp) protein (217aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Endonuclease III n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF47_9CLOT
endonuclease III
L3_072_000G1_scaffold_542_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22493..23197)
DNA (705bp) protein (235aa)
1-acylglycerol-3-phosphate O-acyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6S9_9CLOT
1-acylglycerol-3-phosphate O-acyltransferase {ECO:0000313|EMBL:EEH97011.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sn-glycerol-3-phosphate acyltransferase
L3_072_000G1_scaffold_542_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23232..24221)
DNA (990bp) protein (330aa)
Putative iron-sulfur cluster-binding protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1Z3_9CLOT
Putative iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EEH97010.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
iron-sulfur cluster-binding protein
L3_072_000G1_scaffold_542_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24443..25027)
DNA (585bp) protein (195aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cysE; serine acetyltransferase CysE (EC:2.3.1.30)
Serine O-acetyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2S7_9CLOT
L3_072_000G1_scaffold_542_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25069..25977)
DNA (909bp) protein (303aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cysK; cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCR4_9CLOT
L3_072_000G1_scaffold_542_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26405..27661)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF44_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97007.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_072_000G1_scaffold_542_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28061..28702)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6S7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97006.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_072_000G1_scaffold_542_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28777..29658)
DNA (882bp) protein (294aa)
YegS//BmrU family lipid kinase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1Z2_9CLOT
YegS//BmrU family lipid kinase {ECO:0000313|EMBL:EEH97005.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative lipid kinase
L3_072_000G1_scaffold_542_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29920..30441
DNA (522bp) protein (174aa)
pssA; CDP-diacylglycerol-serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol-serine O-phosphatidyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2S4_9CLOT
CDP-diacylglycerol-serine O-phosphatidyltransferase {ECO:0000313|EMBL:EEH97004.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_072_000G1_scaffold_542_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30501..30851)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97003.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_072_000G1_scaffold_542_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30895..31854)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF42_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97002.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_072_000G1_scaffold_542_28
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31866..32408)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6S5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97001.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rubrerythrin family protein
L3_072_000G1_scaffold_542_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32631..34439)
DNA (1809bp) protein (603aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2S0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96999.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
peptidase, S41 family
L3_072_000G1_scaffold_542_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34909..35307
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96998.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Displaying items 1-30 of 38 in total

View Taxonomy