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L3_072_000G1_scaffold_548

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_548_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..158
DNA (156bp) protein (52aa)
ABC transporter, permease protein n=4 Tax=Bifidobacterium RepID=B6XXP6_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:ETO96459.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
permease component
L3_072_000G1_scaffold_548_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

186..2189
DNA (2004bp) protein (668aa)
Uncharacterized protein n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAR5_WEIPA
Putative glycosyhydrolase {ECO:0000313|EMBL:ETO96489.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_072_000G1_scaffold_548_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2296..3345
DNA (1050bp) protein (350aa)
Putative membrane protein n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1NCA6_9BIFI
Putative inner membrane protein YddG {ECO:0000313|EMBL:ETO96471.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
DMT superfamily permease
L3_072_000G1_scaffold_548_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3841..4725
DNA (885bp) protein (295aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E1NCA5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40827.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_072_000G1_scaffold_548_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5071..6159)
DNA (1089bp) protein (363aa)
Fructose-bisphosphate aldolase, class II {ECO:0000313|EMBL:ETO96447.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ETO96447.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
fba; fructose-biphosphate aldolase (EC:4.1.2.13)
Fructose-biphosphate aldolase n=2 Tax=Bifidobacterium dentium RepID=D2Q729_BIFDB
L3_072_000G1_scaffold_548_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6313..7509
DNA (1197bp) protein (399aa)
polysaccharide deacetylase (EC:3.2.1.8)
Polysaccharide deacetylase n=2 Tax=Bifidobacterium dentium RepID=D2Q730_BIFDB
Polysaccharide deacetylase {ECO:0000313|EMBL:ETO96467.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_548_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7774..9060
DNA (1287bp) protein (429aa)
adenylsuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Adenylosuccinate synthetase n=4 Tax=Bifidobacterium dentium RepID=D2Q731_BIFDB
L3_072_000G1_scaffold_548_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9365..10936
DNA (1572bp) protein (524aa)
Chloride transporter, ClC family n=2 Tax=Bifidobacterium dentium RepID=E0Q999_9BIFI
Chloride transporter, ClC family {ECO:0000313|EMBL:ETO96464.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_072_000G1_scaffold_548_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11172..12212
DNA (1041bp) protein (347aa)
CrcB-like protein, campher resistance n=2 Tax=Bifidobacterium dentium RepID=D2Q733_BIFDB
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
crcB-like protein, campher resistance
L3_072_000G1_scaffold_548_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12212..12580
DNA (369bp) protein (123aa)
Putative fluoride ion transporter CrcB n=4 Tax=Bifidobacterium dentium RepID=D2Q734_BIFDB
crcB-like protein campher resistance
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L3_072_000G1_scaffold_548_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12929..14260
DNA (1332bp) protein (444aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0Q996_9BIFI
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:ETO96493.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
branched-chain amino acid ABC transporter permease
L3_072_000G1_scaffold_548_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14264..15247
DNA (984bp) protein (328aa)
Branched-chain amino acid transport system permease protein n=4 Tax=Bifidobacterium dentium RepID=D2Q736_BIFDB
branched-chain amino acid ABC transporter permease
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EFM40818.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L3_072_000G1_scaffold_548_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15240..16235
DNA (996bp) protein (332aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFM40817.1}; EC=3.6.3.- {ECO:0000313|EMBL:EFM40817.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
branched-chain amino acid transporter ATP-binding protein (EC:3.6.3.30)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q994_9BIFI
L3_072_000G1_scaffold_548_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16237..17250
DNA (1014bp) protein (338aa)
branched-chain amino acid ABC transporter ATPase (EC:3.6.3.30)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q993_9BIFI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO96479.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_548_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17684..18988
DNA (1305bp) protein (435aa)
Branched-chain amino acid transport system substrate-binding protein n=2 Tax=Bifidobacterium dentium RepID=D2Q739_BIFDB
branched-chain amino acid transporter substrate-binding protein
Receptor family ligand-binding protein {ECO:0000313|EMBL:EFM40815.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L3_072_000G1_scaffold_548_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19174..20448
DNA (1275bp) protein (425aa)
Branched-chain amino acid transporter system substrate-binding protein n=3 Tax=Bifidobacterium dentium RepID=D2Q740_BIFDB
branched-chain amino acid transporter substrate-binding protein
Receptor family ligand-binding protein {ECO:0000313|EMBL:ETO96463.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_548_17
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20675..21784
DNA (1110bp) protein (370aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q990_9BIFI
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ETO96451.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
LacI family transcriptional regulator
L3_072_000G1_scaffold_548_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21775..22728)
DNA (954bp) protein (318aa)
branched-chain amino acid aminotransferase (EC:4.1.3.38)
Aminotransferase, class IV n=2 Tax=Bifidobacterium dentium RepID=E0Q989_9BIFI
Aminotransferase, class IV {ECO:0000313|EMBL:ETO96475.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_548_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23132..23917
DNA (786bp) protein (262aa)
UPF0317 protein HMPREF0168_1834 n=2 Tax=Bifidobacterium dentium RepID=E0Q988_9BIFI
UPF0317 protein HMPREF1494_0877 {ECO:0000256|HAMAP-Rule:MF_01830}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_072_000G1_scaffold_548_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23944..24819
DNA (876bp) protein (292aa)
LamB/YcsF family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q987_9BIFI
UPF0271 protein HMPREF1494_0878 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
LamB/YcsF family protein
L3_072_000G1_scaffold_548_21
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24816..26627
DNA (1812bp) protein (604aa)
urea amidolyase (EC:3.5.1.54)
Urea amidolyase related protein n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q745_BIFDB
Sensor histidine kinase inhibitor, KipI family {ECO:0000313|EMBL:ETO96438.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_548_22
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26627..28447
DNA (1821bp) protein (607aa)
biotin-dependent acyl-CoA carboxylase (EC:6.3.4.14)
Carbamoyl-phosphate synthase L chain, ATP binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q985_9BIFI
Carbamoyl-phosphate synthase L chain, ATP-binding domain protein {ECO:0000313|EMBL:ETO96474.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_548_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28504..29532
DNA (1029bp) protein (343aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q984_9BIFI
PF14336 domain protein {ECO:0000313|EMBL:ETO96465.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_072_000G1_scaffold_548_24
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29687..31201
DNA (1515bp) protein (505aa)
Sucrose phosphorylase {ECO:0000313|EMBL:ETO96456.1}; EC=2.4.1.7 {ECO:0000313|EMBL:ETO96456.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
sucrose phosphorylase (EC:3.2.1.54)
Sucrose phosphorylase n=4 Tax=Bifidobacterium dentium RepID=D2Q748_BIFDB
L3_072_000G1_scaffold_548_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31315..31971
DNA (657bp) protein (219aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S859_9BIFI
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26094.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_072_000G1_scaffold_548_26
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31966..33570)
DNA (1605bp) protein (535aa)
oligo-1,6-glucosidase (EC:2.4.1.25)
Alpha amylase, catalytic domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q981_9BIFI
Putative oligo-1,6-glucosidase 1 {ECO:0000313|EMBL:ETO96484.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_548_27
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33903..35192
DNA (1290bp) protein (430aa)
ABC transporter, solute-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q980_9BIFI
Oligopeptide ABC transporter, oligopeptide-binding protein {ECO:0000313|EMBL:ETO96446.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
sugar ABC transporter substrate-binding protein
L3_072_000G1_scaffold_548_28
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35211..36152
DNA (942bp) protein (314aa)
Sugar ABC transport system, permease component n=4 Tax=Bifidobacterium dentium RepID=D2Q752_BIFDB
ABC transporter, permease protein {ECO:0000313|EMBL:ETO96476.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
sugar ABC transporter permease
L3_072_000G1_scaffold_548_29
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36152..37009
DNA (858bp) protein (286aa)
Sugar ABC uptake system, permease component n=4 Tax=Bifidobacterium dentium RepID=D2Q753_BIFDB
sugar ABC transporter permease
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26098.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_072_000G1_scaffold_548_30
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37298..38860
DNA (1563bp) protein (521aa)
Sucrose transporter n=2 Tax=Bifidobacterium dentium RepID=D2Q754_BIFDB
scrT; sucrose transporter
Sucrose transporter {ECO:0000313|EMBL:ADB08800.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Displaying items 1-30 of 33 in total

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