ggKbase home page

L3_072_000G1_scaffold_553

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_553_1
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

201..884
DNA (684bp) protein (228aa)
Response regulator receiver domain protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8H4_9ACTO
Response regulator {ECO:0000313|EMBL:ETJ06604.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
two component transcriptional regulator, winged helix family
L3_072_000G1_scaffold_553_2
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

881..2833
DNA (1953bp) protein (651aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8H5_9ACTO
histidine kinase
L3_072_000G1_scaffold_553_3
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2990..3634)
DNA (645bp) protein (215aa)
Ribosomal subunit interface protein n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8H6_9ACTO
Ribosomal subunit interface protein {ECO:0000313|EMBL:EEH64975.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
sigma 54 modulation protein/30S ribosomal protein S30EA
L3_072_000G1_scaffold_553_4
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3841..4767)
DNA (927bp) protein (309aa)
Uncharacterized protein (Fragment) n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8H7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EEH64965.1}; Flags: Fragment;; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
phosphoribosyltransferase
L3_072_000G1_scaffold_553_5
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5029..7806
DNA (2778bp) protein (926aa)
Protein translocase subunit SecA n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8H8_9ACTO
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
preprotein translocase subunit SecA
L3_072_000G1_scaffold_553_6
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7842..8480)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8H9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EEH64967.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
energy transducer TonB
L3_072_000G1_scaffold_553_7
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8510..9586)
DNA (1077bp) protein (359aa)
UPI0003D5DAC8 related cluster n=1 Tax=unknown RepID=UPI0003D5DAC8
Uncharacterized protein {ECO:0000313|EMBL:ETJ06758.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
peptidoglycan-binding lysin domain-containing protein
L3_072_000G1_scaffold_553_8
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9675..10244
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8I3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETJ06757.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
L3_072_000G1_scaffold_553_9
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10274..10495)
DNA (222bp) protein (74aa)
DNA binding domain, excisionase family n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8I4_9ACTO
DNA binding domain, excisionase family {ECO:0000313|EMBL:EEH64963.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
DNA binding domain-containing protein
L3_072_000G1_scaffold_553_10
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10606..11928
DNA (1323bp) protein (441aa)
Uncharacterized protein (Fragment) n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8I6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETJ04714.1}; Flags: Fragment;; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
chromosome partitioning ATPase
L3_072_000G1_scaffold_553_11
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12165..13055
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8I7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGF01308.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
hypothetical protein
L3_072_000G1_scaffold_553_12
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13052..14296
DNA (1245bp) protein (415aa)
UPI0003D64B96 related cluster n=1 Tax=unknown RepID=UPI0003D64B96
Uncharacterized protein {ECO:0000313|EMBL:KGF01309.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
hypothetical protein
L3_072_000G1_scaffold_553_13
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14241..14708
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8I9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGF01310.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
hypothetical protein
L3_072_000G1_scaffold_553_14
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15313..15780
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Actinomyces naeslundii str. Howell 279 RepID=J3F2H7_ACTNA
Mucin {ECO:0000313|EMBL:KGF01312.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
hypothetical protein
L3_072_000G1_scaffold_553_15
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15787..18999)
DNA (3213bp) protein (1071aa)
Exonuclease SbcCD, C subunit n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8J1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGF01313.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
sbcC; ATP-dependent dsDNA exonuclease SbcC
L3_072_000G1_scaffold_553_16
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18999..20324)
DNA (1326bp) protein (442aa)
UPI0003D61F0F related cluster n=1 Tax=unknown RepID=UPI0003D61F0F
Nuclease {ECO:0000313|EMBL:KGF01314.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
exodeoxyribonuclease I subunit D
L3_072_000G1_scaffold_553_17
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20396..21256)
DNA (861bp) protein (287aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
uppP; undecaprenyl-diphosphatase UppP (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8J3_9ACTO
L3_072_000G1_scaffold_553_18
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21377..22891
DNA (1515bp) protein (505aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8J4_9ACTO
3-beta hydroxysteroid dehydrogenase {ECO:0000313|EMBL:KGF01316.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
3-beta hydroxysteroid dehydrogenase/isomerase
L3_072_000G1_scaffold_553_19
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22912..23739)
DNA (828bp) protein (276aa)
Histidinol-phosphate phosphatase HisN n=3 Tax=Actinomycetales RepID=C0W8J5_9ACTO
Histidinol phosphatase {ECO:0000313|EMBL:KGF01317.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
histidinol-phosphate phosphatase
L3_072_000G1_scaffold_553_20
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23736..24533)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8J6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EEH64957.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
hypothetical protein
L3_072_000G1_scaffold_553_21
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24701..26422)
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8J7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGF01318.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
methyltransferase small
L3_072_000G1_scaffold_553_22
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26486..27691)
DNA (1206bp) protein (402aa)
GroES-like protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8J8_9ACTO
Alcohol dehydrogenase zinc-binding protein {ECO:0000313|EMBL:ETJ01914.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
theronine dehydrogenase-like Zn-dependent dehydrogenase
L3_072_000G1_scaffold_553_23
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27803..29779)
DNA (1977bp) protein (659aa)
Sulfate ABC transporter, ATP-binding protein (EC:3.6.3.29)
Molybdate ABC superfamily ATP binding cassette transporter n=1 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EIH9_9ACTO
Molybdate ABC superfamily ATP binding cassette transporter {ECO:0000313|EMBL:ETJ01913.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
L3_072_000G1_scaffold_553_24
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29776..30594)
DNA (819bp) protein (273aa)
Molybdate ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8K1_9ACTO
Molybdate ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:EEH64940.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
modA; molybdate ABC transporter substrate-binding protein
L3_072_000G1_scaffold_553_25
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30751..31545)
DNA (795bp) protein (265aa)
narI; nitrate reductase (EC:1.7.99.4)
Respiratory nitrate reductase, gamma subunit n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8K2_9ACTO
Nitrate reductase {ECO:0000313|EMBL:ETJ01911.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
L3_072_000G1_scaffold_553_26
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31542..32249)
DNA (708bp) protein (236aa)
Nitrate reductase molybdenum cofactor assembly chaperone n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8K3_9ACTO
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:EEH64942.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
Nitrate reductase subunit delta
L3_072_000G1_scaffold_553_27
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32255..33880)
DNA (1626bp) protein (542aa)
Nitrate reductase, beta subunit {ECO:0000313|EMBL:EEH64943.1}; EC=1.7.99.4 {ECO:0000313|EMBL:EEH64943.1};; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
Nitrate reductase, beta subunit n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8K4_9ACTO
narY; nitrate reductase Z subunit beta
L3_072_000G1_scaffold_553_28
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33880..37656)
DNA (3777bp) protein (1259aa)
Nitrate reductase, alpha subunit {ECO:0000313|EMBL:EEH64944.1}; EC=1.7.99.4 {ECO:0000313|EMBL:EEH64944.1};; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
narG; nitrate reductase subunit alpha (EC:1.7.99.4)
Nitrate reductase, alpha subunit n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8K5_9ACTO
L3_072_000G1_scaffold_553_29
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37717..39099)
DNA (1383bp) protein (461aa)
Transporter, major facilitator family protein n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8K6_9ACTO
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEH64945.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
nitrite extrusion protein
L3_072_000G1_scaffold_553_30
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39309..39917
DNA (609bp) protein (203aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8K7_9ACTO
Molybdenum cofactor biosynthesis protein {ECO:0000313|EMBL:KGF01325.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
Molybdenum cofactor synthesis domain-containing protein
Displaying items 1-30 of 34 in total

View Taxonomy