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L3_072_000G1_scaffold_565

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_565_1
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..2213
DNA (2211bp) protein (737aa)
SNF2-related protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3E3_CLOSW
Helicase SNF2 {ECO:0000313|EMBL:KEZ90400.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
SNF2-like protein
L3_072_000G1_scaffold_565_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2228..2848
DNA (621bp) protein (207aa)
NADPH-dependent FMN reductase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X8D2_9CLOT
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ENY92148.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
NADPH-dependent FMN reductase
L3_072_000G1_scaffold_565_3
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2881..5091
DNA (2211bp) protein (737aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:ADL04890.1}; EC=1.17.4.2 {ECO:0000313|EMBL:ADL04890.1};; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3E1_CLOSW
L3_072_000G1_scaffold_565_4
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5102..5620
DNA (519bp) protein (173aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3E0_CLOSW
anaerobic ribonucleoside-triphosphate reductase activating protein
L3_072_000G1_scaffold_565_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5688..7115)
DNA (1428bp) protein (476aa)
MATE efflux family protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VND1_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ENY92155.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
MATE efflux family protein
L3_072_000G1_scaffold_565_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7300..7980
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X8Z8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92156.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Predicted membrane protein
L3_072_000G1_scaffold_565_7
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8076..8645
DNA (570bp) protein (190aa)
Putative transcriptional regulator n=2 Tax=Clostridium RepID=R5T4A5_9CLOT
TetR family transcriptional regulator {ECO:0000313|EMBL:KEZ86625.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
transcriptional regulator
L3_072_000G1_scaffold_565_8
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8809..9957
DNA (1149bp) protein (383aa)
lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase n=2 Tax=Clostridium RepID=D3AL24_9CLOT
L-1,2-propanediol oxidoreductase {ECO:0000313|EMBL:KEZ86626.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
L3_072_000G1_scaffold_565_9
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10143..11543
DNA (1401bp) protein (467aa)
MATE efflux family protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3D1_CLOSW
Putative efflux protein, MATE family {ECO:0000313|EMBL:EXG87128.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
MATE efflux family protein
L3_072_000G1_scaffold_565_10
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11651..12778
DNA (1128bp) protein (376aa)
Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517};; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
Branched-chain-amino-acid aminotransferase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3C7_CLOSW
branched-chain amino acid aminotransferase
L3_072_000G1_scaffold_565_11
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12856..13767
DNA (912bp) protein (304aa)
Auxin Efflux Carrier n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3C6_CLOSW
auxin efflux carrier family protein
Auxin Efflux Carrier {ECO:0000313|EMBL:ADL04875.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_565_12
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14123..16084
DNA (1962bp) protein (654aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
Threonine--tRNA ligase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3C5_CLOSW
threonyl-tRNA synthetase
L3_072_000G1_scaffold_565_13
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16205..16519
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3C4_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL04873.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_565_14
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16562..16975)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VNI0_9CLOT
Membrane protein {ECO:0000313|EMBL:KEZ86634.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L3_072_000G1_scaffold_565_15
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17352..17846
DNA (495bp) protein (165aa)
Translation initiation factor IF-3 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3C2_CLOSW
translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_565_16
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17874..18071
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3C1_CLOSW
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_565_17
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18101..18457
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3C0_CLOSW
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
50S ribosomal protein L20
L3_072_000G1_scaffold_565_18
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18778..19335)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZA9_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:EXG85039.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_072_000G1_scaffold_565_19
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19708..20160
DNA (453bp) protein (151aa)
Uncharacterized protein n=3 Tax=Bacillus cereus RepID=R8K9L0_BACCE
Transcriptional regulator HosA {ECO:0000313|EMBL:KHF33361.1}; TaxID=1472719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P1XP2.;"
MarR family transcriptional regulator
L3_072_000G1_scaffold_565_20
Bacillus infantis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20187..20714
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=Bacillus RepID=U5LJM7_9BACI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX06842.1}; TaxID=1367477 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus infantis NRRL B-14911.;"
L3_072_000G1_scaffold_565_21
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20968..21288)
DNA (321bp) protein (107aa)
Multidrug resistance protein, SMR family n=1 Tax=Clostridium sp. MSTE9 RepID=J1H968_9CLOT
Multidrug resistance protein, SMR family {ECO:0000313|EMBL:EJF42170.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
small multidrug resistance protein
L3_072_000G1_scaffold_565_22
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21611..22510
DNA (900bp) protein (300aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R369_CLOSW
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADL04818.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_565_23
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22665..22922)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R530_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL05137.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_565_24
unknown

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22927..23166
DNA (240bp) protein (80aa)

This feature has no annotations

L3_072_000G1_scaffold_565_25
unknown

Not on your lists

23226..23441
DNA (216bp) protein (72aa)

This feature has no annotations

L3_072_000G1_scaffold_565_26
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24441..26081)
DNA (1641bp) protein (547aa)
Diguanylate cyclase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3A3_CLOSW
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ADL04852.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_565_27
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26262..27479)
DNA (1218bp) protein (406aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
Phosphofructokinase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3A2_CLOSW
phosphofructokinase
L3_072_000G1_scaffold_565_28
unknown

Not on your lists

27636..27794
DNA (159bp) protein (53aa)

This feature has no annotations

L3_072_000G1_scaffold_565_29
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28409..28708
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R901_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL03976.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_565_30
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28856..29074)
DNA (219bp) protein (73aa)
Heavy metal transport/detoxification protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R396_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:EXG86000.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
heavy metal transport/detoxification protein
Displaying items 1-30 of 49 in total

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