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L3_072_000G1_scaffold_572

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_572_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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389..988
DNA (600bp) protein (200aa)
Transcriptional regulator n=15 Tax=Bacteroides RepID=A6KXE0_BACV8
TetR family transcriptional regulator
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KDS28206.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_072_000G1_scaffold_572_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1019..1765
DNA (747bp) protein (249aa)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:KDS28205.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KDS28205.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
3-oxoacyl-[acyl-carrier protein] reductase n=14 Tax=Bacteroides RepID=A6KXD9_BACV8
3-oxoacyl-ACP reductase
L3_072_000G1_scaffold_572_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1767..2438
DNA (672bp) protein (224aa)
Ribosomal large subunit pseudouridine synthase D n=7 Tax=Bacteroides RepID=A6KXD8_BACV8
ribosomal large subunit pseudouridine synthase D
RNA pseudouridylate synthase family protein {ECO:0000313|EMBL:KDS54939.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_072_000G1_scaffold_572_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2503..2808)
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9ILZ2_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS00172.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_072_000G1_scaffold_572_5
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3093..4475)
DNA (1383bp) protein (461aa)
Two-component system response regulator n=6 Tax=root RepID=A6KXD6_BACV8
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:EFV66956.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_072_000G1_scaffold_572_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4577..7144)
DNA (2568bp) protein (856aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9TXI1_BACVU
His Kinase A domain protein {ECO:0000313|EMBL:KDS54936.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
two-component hybrid sensor kinase/response regulator
L3_072_000G1_scaffold_572_7
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7158..8468)
DNA (1311bp) protein (437aa)
MATE efflux family protein n=3 Tax=Bacteroides RepID=C6Z761_9BACE
multidrug efflux protein
Multidrug efflux protein {ECO:0000313|EMBL:EFV66958.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_072_000G1_scaffold_572_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8562..9806)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9TYA7_BACVU
zinc protease
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:KDS54934.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_072_000G1_scaffold_572_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9819..10664)
DNA (846bp) protein (282aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Peptidyl-prolyl cis-trans isomerase n=5 Tax=Bacteroides RepID=A6KXD2_BACV8
cyclophilin type peptidyl-prolyl cis-trans isomerase
L3_072_000G1_scaffold_572_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11374..16023
DNA (4650bp) protein (1550aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KXD0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS28196.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_072_000G1_scaffold_572_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16020..18377
DNA (2358bp) protein (786aa)
Outer membrane protein, OMP85 family n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V526_BACVU
Surface antigen family protein {ECO:0000313|EMBL:KDS28195.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
membrane protein
L3_072_000G1_scaffold_572_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18512..19423
DNA (912bp) protein (304aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=A6KXC8_BACV8
nucleotidyltransferase
Uncharacterized protein {ECO:0000313|EMBL:ABR38092.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_072_000G1_scaffold_572_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19528..20430)
DNA (903bp) protein (301aa)
Transcriptional regulator n=7 Tax=Bacteroides RepID=A6KXC7_BACV8
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABR38091.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_072_000G1_scaffold_572_14
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20642..21322
DNA (681bp) protein (227aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=A6KXC6_BACV8
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17326.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_072_000G1_scaffold_572_15
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21536..25858
DNA (4323bp) protein (1441aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bacteroides RepID=C6Z747_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EET16706.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
two-component system sensor histidine kinase/response regulator, hybrid
L3_072_000G1_scaffold_572_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26023..27627
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9TXJ0_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY74476.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_072_000G1_scaffold_572_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27749..28363
DNA (615bp) protein (205aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase n=7 Tax=Bacteroides RepID=A6KXB6_BACV8
3,4-dihydroxy-2-butanone 4-phosphate synthase
L3_072_000G1_scaffold_572_18
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28375..29130
DNA (756bp) protein (252aa)
Transcriptional regulator of sugar metabolism n=15 Tax=root RepID=A6KXB5_BACV8
alkaline phosphatase
Transcriptional regulator of sugar metabolism {ECO:0000313|EMBL:CDF17330.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_072_000G1_scaffold_572_19
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29472..30317
DNA (846bp) protein (282aa)
Transketolase, N-terminal subunit n=4 Tax=Bacteroides RepID=A6KXB4_BACV8
transketolase
Transketolase thiamine diphosphate binding domain protein {ECO:0000313|EMBL:CDF17331.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_072_000G1_scaffold_572_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30319..31245
DNA (927bp) protein (309aa)
Transketolase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H8R4_BACVU
Transketolase {ECO:0000313|EMBL:EOS00156.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
transketolase
L3_072_000G1_scaffold_572_21
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31271..32767
DNA (1497bp) protein (499aa)
Glycerol kinase 2 n=2 Tax=Bacteroides RepID=E5UV69_9BACE
Putative glycerol kinase {ECO:0000313|EMBL:EET16701.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
glycerol kinase
L3_072_000G1_scaffold_572_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32801..34225
DNA (1425bp) protein (475aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6KXB1_BACV8
hypothetical protein
L-fucose isomerase, C-terminal domain protein {ECO:0000313|EMBL:KDS28179.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_072_000G1_scaffold_572_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34238..35254
DNA (1017bp) protein (339aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z740_9BACE
integral membrane protein
Ureide permease family protein {ECO:0000313|EMBL:KDS54918.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_072_000G1_scaffold_572_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35292..36110
DNA (819bp) protein (273aa)
Periplasmic binding protein and sugar binding domain of the LacI family protein n=3 Tax=root RepID=D4V7U1_BACVU
Periplasmic binding s and sugar binding domain of LacI family protein {ECO:0000313|EMBL:KDS54917.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
sugar ABC transporter
L3_072_000G1_scaffold_572_25
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


36269..37633
DNA (1365bp) protein (455aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=2 Tax=Bacteroides RepID=R7NZ07_9BACE
L3_072_000G1_scaffold_572_26
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38035..40260
DNA (2226bp) protein (742aa)
Helicase n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NVB1_9BACE
Helicase {ECO:0000313|EMBL:CDF17339.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
helicase
L3_072_000G1_scaffold_572_27
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40271..41038
DNA (768bp) protein (256aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6Z736_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV66983.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
antirepressor
Displaying 27 items

View Taxonomy