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L3_072_000G1_scaffold_574

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_574_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(135..476)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98822.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
HIT family protein
L3_072_000G1_scaffold_574_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(769..2073)
DNA (1305bp) protein (435aa)
MiaB/RimO family radical SAM methylthiotransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8A9_9CLOT
MiaB/RimO family radical SAM methylthiotransferase {ECO:0000313|EMBL:EEH98823.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
MiaB-like tRNA modifying enzyme
L3_072_000G1_scaffold_574_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2076..2828)
DNA (753bp) protein (251aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rsmE; ribosomal RNA small subunit methyltransferase E (EC:2.1.1.193)
RsmE family RNA methyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHE9_9CLOT
L3_072_000G1_scaffold_574_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2847..3788)
DNA (942bp) protein (314aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
prmA; ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG05_9CLOT
L3_072_000G1_scaffold_574_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3949..4446)
DNA (498bp) protein (166aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4N6_9CLOT
peroxiredoxin
L3_072_000G1_scaffold_574_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4598..6148)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98827.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ferredoxin-nitrite reductase
L3_072_000G1_scaffold_574_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6333..7463)
DNA (1131bp) protein (377aa)
Chaperone dnaJ n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8B1_9CLOT
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
dnaJ; chaperone protein DnaJ
L3_072_000G1_scaffold_574_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7576..9432)
DNA (1857bp) protein (619aa)
Chaperone dnaK n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHF1_9CLOT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
dnaK; chaperone protein DnaK
L3_072_000G1_scaffold_574_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9486..10088)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG08_9CLOT
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
grpE; heat shock protein GrpE
L3_072_000G1_scaffold_574_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10107..11138)
DNA (1032bp) protein (344aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4N8_9CLOT
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hrcA; heat-inducible transcription repressor HrcA
L3_072_000G1_scaffold_574_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11328..12485)
DNA (1158bp) protein (386aa)
hemN; oxygen-independent coproporphyrinogen-III oxidase 1 (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V4_9CLOT
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EEH98832.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_072_000G1_scaffold_574_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12582..12851)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8B3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98833.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_072_000G1_scaffold_574_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13098..14009
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHF3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98834.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
patatin-like phospholipase
L3_072_000G1_scaffold_574_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14138..16039)
DNA (1902bp) protein (634aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
lepA; elongation factor 4 (EC:3.6.5.n1)
Elongation factor 4 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG11_9CLOT
L3_072_000G1_scaffold_574_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16084..16611)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4P0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98836.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_072_000G1_scaffold_574_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16676..17776)
DNA (1101bp) protein (367aa)
Stage II sporulation protein P n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V6_9CLOT
Stage II sporulation protein P {ECO:0000313|EMBL:EEH98837.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
stage II sporulation protein P
L3_072_000G1_scaffold_574_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17854..18828)
DNA (975bp) protein (325aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
gpr; GPR endopeptidase (EC:3.4.24.78)
GPR endopeptidase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8B5_9CLOT
L3_072_000G1_scaffold_574_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19004..19267
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHF5_9CLOT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rpsT; ribosomal protein S20
L3_072_000G1_scaffold_574_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19313..20344)
DNA (1032bp) protein (344aa)
holA; DNA polymerase III, subunit delta (EC:2.7.7.7)
DNA polymerase III, delta subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG18_9CLOT
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EEH98840.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_072_000G1_scaffold_574_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20361..22049)
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4P2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98841.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_072_000G1_scaffold_574_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22074..24572)
DNA (2499bp) protein (833aa)
HAD ATPase, P-type, family IC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V7_9CLOT
HAD ATPase, P-type, family IC {ECO:0000313|EMBL:EEH98842.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
calcium-transporting ATPase
L3_072_000G1_scaffold_574_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24737..25093)
DNA (357bp) protein (119aa)
Stage V sporulation protein AE n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8B7_9CLOT
Stage V sporulation protein AE {ECO:0000313|EMBL:EEH98843.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spoVAE; stage V sporulation protein AE
L3_072_000G1_scaffold_574_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25109..26143)
DNA (1035bp) protein (345aa)
Stage V sporulation protein AD n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHF7_9CLOT
Stage V sporulation protein AD {ECO:0000313|EMBL:EEH98844.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spoVAD; stage V sporulation protein AD
L3_072_000G1_scaffold_574_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26159..26629)
DNA (471bp) protein (157aa)
Stage V sporulation protein AC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG25_9CLOT
Stage V sporulation protein AC {ECO:0000313|EMBL:EEH98845.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spoVAC1; stage V sporulation protein AC
L3_072_000G1_scaffold_574_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26812..27567)
DNA (756bp) protein (252aa)
RNA polymerase sigma-F factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4P4_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sigF; sporulation sigma factor SigF
L3_072_000G1_scaffold_574_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27577..28008)
DNA (432bp) protein (144aa)
Anti-sigma F factor {ECO:0000256|HAMAP-Rule:MF_00637}; EC=2.7.11.1 {ECO:0000256|HAMAP-Rule:MF_00637};; Stage II sporulation protein AB {ECO:0000256|HAMAP-Rule:MF_00637}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spoIIAB; anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V9_9CLOT
L3_072_000G1_scaffold_574_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28023..28358)
DNA (336bp) protein (112aa)
Anti-sigma F factor antagonist n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8B8_9CLOT
Anti-sigma F factor antagonist {ECO:0000256|RuleBase:RU003749}; Stage II sporulation protein {ECO:0000256|RuleBase:RU003749}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
anti-sigma-factor antagonist
L3_072_000G1_scaffold_574_28
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28708..31017)
DNA (2310bp) protein (770aa)
Putative ATP-dependent protease n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHF9_9CLOT
Putative ATP-dependent protease {ECO:0000313|EMBL:EEH98849.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative ATP-dependent protease
L3_072_000G1_scaffold_574_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31301..32473)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98850.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
beta-lactamase domain protein
L3_072_000G1_scaffold_574_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32609..34891)
DNA (2283bp) protein (761aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
helD1; helicase IV (EC:3.6.4.12)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4P6_9CLOT
Displaying items 1-30 of 36 in total

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