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L3_072_000G1_scaffold_576

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_576_1
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2..904)
DNA (903bp) protein (301aa)
Aryl-phospho-beta-D-glucosidase BglH n=1 Tax=Turicibacter sp. HGF1 RepID=F0HGI5_9FIRM
6-phospho-beta-glucosidase
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EFF64200.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
L3_072_000G1_scaffold_576_2
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(981..2510)
DNA (1530bp) protein (510aa)
Putative peptidoglycan binding domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AD17_9CLOT
Peptidoglycan-binding protein {ECO:0000313|EMBL:KEZ88579.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
peptidoglycan-binding domain-containing protein
L3_072_000G1_scaffold_576_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2542..4143)
DNA (1602bp) protein (534aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IE16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60252.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
VanW family protein
L3_072_000G1_scaffold_576_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4276..5670)
DNA (1395bp) protein (465aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GLZ6_CLOSY
hypothetical protein
L3_072_000G1_scaffold_576_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5667..6368)
DNA (702bp) protein (234aa)
Winged helix family Two component transcriptional regulator n=4 Tax=Clostridium RepID=E7GLZ5_CLOSY
Winged helix family Two component transcriptional regulator {ECO:0000313|EMBL:EGA94171.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
winged helix family two component transcriptional regulator
L3_072_000G1_scaffold_576_6
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(6504..7055)
DNA (552bp) protein (184aa)
Membrane-associated phospholipid phosphatase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LRL4_9FIRM
Membrane-associated phospholipid phosphatase {ECO:0000313|EMBL:CDB88510.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Membrane-associated phospholipid phosphatase
L3_072_000G1_scaffold_576_7
Bacillus sp. M 2-6, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7350..8243
DNA (894bp) protein (298aa)
Hydrolase n=1 Tax=Bacillus sp. M 2-6 RepID=I4V955_9BACI
Hydrolase {ECO:0000313|EMBL:EIL83746.1}; TaxID=1177926 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. M 2-6.;"
hydrolase
L3_072_000G1_scaffold_576_8
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8298..8639)
DNA (342bp) protein (114aa)
Hydrogenase expression/synthesis HypA n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9J7_CLOSW
hydrogenase nickel incorporation protein HypA
Hydrogenase expression/synthesis HypA {ECO:0000313|EMBL:ADL04047.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_576_9
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8659..11349)
DNA (2691bp) protein (897aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9J6_CLOSW
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ADL04046.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L3_072_000G1_scaffold_576_10
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11419..12087)
DNA (669bp) protein (223aa)
Hydrogenase accessory protein HypB n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9J5_CLOSW
hydrogenase nickel incorporation protein HypB
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EXG85868.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
L3_072_000G1_scaffold_576_11
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12468..13448)
DNA (981bp) protein (327aa)
alpha-keto acid dehydrogenase (EC:1.1.1.-)
D-lactate dehydrogenase n=1 Tax=Clostridium arbusti RepID=UPI000289CD00
Lactate dehydrogenase {ECO:0000313|EMBL:AEI90736.1}; TaxID=84023 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum.;"
L3_072_000G1_scaffold_576_12
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13494..14150)
DNA (657bp) protein (219aa)
Sulfite reductase, beta subunit (Hemoprotein) n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KHA1_CLOPA
sulfite reductase, beta subunit (hemoprotein)
Sulfite reductase, beta subunit (Hemoprotein) {ECO:0000313|EMBL:AGK98990.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L3_072_000G1_scaffold_576_13
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14174..15049)
DNA (876bp) protein (292aa)
ferredoxin-nitrite reductase n=1 Tax=Clostridium arbusti RepID=UPI00028942F0
sulfite reductase, beta subunit (hemoprotein)
Sulfite reductase, beta subunit (Hemoprotein) {ECO:0000313|EMBL:AGK98990.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L3_072_000G1_scaffold_576_14
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15197..16081
DNA (885bp) protein (295aa)
Transcriptional regulator, LysR family n=3 Tax=Clostridium acetobutylicum RepID=F0KD45_CLOAE
LysR family transcriptional regulator
Transcriptional regulators, LysR family {ECO:0000313|EMBL:AAK78078.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
L3_072_000G1_scaffold_576_15
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16078..18390)
DNA (2313bp) protein (771aa)
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase {ECO:0000256|RuleBase:RU000675}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU000675};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
Beta-galactosidase n=2 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=M4Y5D9_CLOSH
L3_072_000G1_scaffold_576_16
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18491..19255)
DNA (765bp) protein (255aa)
glutamine amidotransferase (EC:6.3.5.2)
Glutamine amidotransferase-like protein yfeJ n=3 Tax=Bacillus cereus RepID=C2TQJ9_BACCE
Glutamine amidotransferase-like protein yfeJ {ECO:0000313|EMBL:EEL13948.1}; TaxID=526979 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus 95/8201.;"
L3_072_000G1_scaffold_576_17
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19406..19645
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R0K0_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:EXG87592.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_072_000G1_scaffold_576_18
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19792..22878)
DNA (3087bp) protein (1029aa)
Exoglucanase-2; EC=3.2.1.91;; 1,4-beta-cellobiohydrolase II; Avicelase II; Exocellobiohydrolase II; Exoglucanase II; Flags: Precursor;; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
celY; exoglucanase-2 (EC:3.2.1.91)
CelY n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=M4Y6U9_CLOSH
L3_072_000G1_scaffold_576_19
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23335..25476)
DNA (2142bp) protein (714aa)
Alanine racemase {ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|SAAS:SAAS00021659};; TaxID=1351 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis (Streptococcus faecalis).;"
VanTG2 n=1 Tax=Enterococcus faecalis RepID=Q30BE9_ENTFL
amino acid racemase
L3_072_000G1_scaffold_576_20
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25469..26236)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2B314_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ34801.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
D-alanyl-D-alanine carboxypeptidase
L3_072_000G1_scaffold_576_21
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26233..27282)
DNA (1050bp) protein (350aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1311 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus agalactiae.;"
D-alanine--D-alanine ligase n=3 Tax=Firmicutes RepID=Q6WRY5_ENTFL
vanB; D-alanine--D-alanine ligase
L3_072_000G1_scaffold_576_22
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27467..28570)
DNA (1104bp) protein (368aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1351 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis (Streptococcus faecalis).;"
VanSG2 n=1 Tax=Enterococcus faecalis RepID=Q30BF3_ENTFL
two-component sensor histidine kinase
L3_072_000G1_scaffold_576_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28563..29264)
DNA (702bp) protein (234aa)
Response regulator n=1 Tax=Clostridium difficile P51 RepID=T4RP62_CLODI
Response regulator receiver domain protein {ECO:0000313|EMBL:EDS00890.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_072_000G1_scaffold_576_24
unknown

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comp(29423..30400)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Brevibacillus brevis RepID=UPI00036C7954
L3_072_000G1_scaffold_576_25
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(30438..31061)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Burkholderia pseudomallei NCTC 13179 RepID=U5V5K2_BURPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_56924.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
L3_072_000G1_scaffold_576_26
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31148..32155)
DNA (1008bp) protein (336aa)
Amidohydrolase 2 n=1 Tax=Clostridium sp. CAG:242 RepID=R6CFY6_9CLOT
Amidohydrolase 2 {ECO:0000313|EMBL:CDA75603.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
amidohydrolase 2
L3_072_000G1_scaffold_576_27
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32173..33570)
DNA (1398bp) protein (466aa)
Flavin oxidoreductase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MS97_9CLOT
flavin oxidoreductase
Flavin oxidoreductase {ECO:0000313|EMBL:AGF54462.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_072_000G1_scaffold_576_28

Not on your lists

33743..34318
DNA (576bp) protein (192aa)
Transcriptional regulator n=1 Tax=uncultured bacterium RepID=K2D442_9BACT
Transcriptional regulator {ECO:0000313|EMBL:EKD88238.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transcriptional regulator, TetR family
L3_072_000G1_scaffold_576_29
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34601..35155
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KS88_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX42120.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_072_000G1_scaffold_576_30
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35205..35606)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MY98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS75681.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
Displaying items 1-30 of 35 in total

View Taxonomy