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L3_072_000G1_scaffold_577

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_577_1
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(147..1058)
DNA (912bp) protein (304aa)
Uncharacterized protein n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2NPB4_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK21620.1}; TaxID=1215914 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei W56.;"
L3_072_000G1_scaffold_577_2
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1764..2477
DNA (714bp) protein (238aa)
Amino acid ABC transporter membrane protein, PAAT family n=21 Tax=Lactobacillus casei group RepID=Q03BH6_LACC3
amino acid ABC transporter permease
Amino acid ABC transporter permease {ECO:0000313|EMBL:EPC57862.1}; TaxID=1256201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp123.;"
L3_072_000G1_scaffold_577_3
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2509..3321
DNA (813bp) protein (271aa)
Collagen binding protein n=29 Tax=Lactobacillus casei group RepID=B3W8G9_LACCB
amino-acid ABC transporter-binding protein HI_1080
Periplasmic-binding component of an ABC-type amino acid transport/signal transduction system {ECO:0000313|EMBL:EKQ15043.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
L3_072_000G1_scaffold_577_4
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3423..4559
DNA (1137bp) protein (379aa)
Cystathionine gamma-lyase n=4 Tax=Lactobacillus casei group RepID=K6SW98_LACCA
Cystathionine beta-lyase {ECO:0000313|EMBL:ERN49239.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
cystathionine beta-lyase/cystathionine gamma-synthase
L3_072_000G1_scaffold_577_5
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4640..5560)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Lactobacillus casei CRF28 RepID=K6RGL4_LACCA
Uncharacterized protein {ECO:0000313|EMBL:EKQ23925.1}; TaxID=1051661 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UW4.;"
hypothetical protein
L3_072_000G1_scaffold_577_6
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5669..6214
DNA (546bp) protein (182aa)
Hydrophobic protein n=3 Tax=Lactobacillus casei group RepID=C5F9U6_LACPA
hypothetical protein
Hydrophobic protein {ECO:0000313|EMBL:EEQ67213.2}; TaxID=537973 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei 8700:2.;"
L3_072_000G1_scaffold_577_7
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6408..7337)
DNA (930bp) protein (310aa)
cysK; cysteine synthase (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
Cysteine synthase n=40 Tax=Lactobacillus casei group RepID=B3W7R6_LACCB
L3_072_000G1_scaffold_577_8
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7371..8186)
DNA (816bp) protein (272aa)
Homoserine trans-succinylase n=23 Tax=Lactobacillus casei group RepID=S6BNU6_LACPA
Homoserine O-succinyltransferase {ECO:0000313|EMBL:ERN48871.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
homoserine O-succinyltransferase
L3_072_000G1_scaffold_577_9
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8631..9530)
DNA (900bp) protein (300aa)
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
Shikimate dehydrogenase n=3 Tax=Lactobacillus casei group RepID=Q03BU3_LACC3
L3_072_000G1_scaffold_577_10
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9549..10766)
DNA (1218bp) protein (406aa)
Inner membrane transport protein ydiM n=10 Tax=Lactobacillus casei group RepID=K0MSV4_LACCA
Putative transporter; MFS superfamily
Inner membrane transport protein ydiM {ECO:0000313|EMBL:EPC91987.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L3_072_000G1_scaffold_577_11
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10800..11690)
DNA (891bp) protein (297aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1318635 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei LOCK919.;"
Shikimate dehydrogenase n=13 Tax=Lactobacillus casei group RepID=B3W7R2_LACCB
shikimate 5-dehydrogenase
L3_072_000G1_scaffold_577_12
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11787..12620)
DNA (834bp) protein (278aa)
Short-chain alcohol dehydrogenase n=40 Tax=Lactobacillus casei group RepID=C5F9T9_LACPA
Short-chain alcohol dehydrogenase
Short-chain alcohol dehydrogenase {ECO:0000313|EMBL:EPC87305.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_072_000G1_scaffold_577_13
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12637..13503)
DNA (867bp) protein (289aa)
Inosose isomerase {ECO:0000313|EMBL:EKQ15250.1}; EC=5.3.99.- {ECO:0000313|EMBL:EKQ15250.1};; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
Sugar phosphate isomerase/epimerase n=20 Tax=Lactobacillus casei group RepID=S4ZJM2_LACCA
Sugar phosphate isomerase/epimerase
L3_072_000G1_scaffold_577_14
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13658..14551
DNA (894bp) protein (298aa)
Transcriptional regulator, LysR family n=19 Tax=Lactobacillus casei group RepID=Q03BU8_LACC3
transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:ERN48867.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L3_072_000G1_scaffold_577_15
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14730..15233
DNA (504bp) protein (168aa)
Periplasmic/secreted protein n=35 Tax=Lactobacillus casei group RepID=C5F9T6_LACPA
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:EKQ13127.1}; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
L3_072_000G1_scaffold_577_16
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15343..16785)
DNA (1443bp) protein (481aa)
Amino acid transporter protein n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S6BNT6_LACPA
transporter
APC family amino acid-polyamine-organocation transporter {ECO:0000313|EMBL:GAN37995.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L3_072_000G1_scaffold_577_17
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17392..19926)
DNA (2535bp) protein (845aa)
Lysyl aminopeptidase {ECO:0000313|EMBL:EKQ15293.1}; EC=3.4.11.15 {ECO:0000313|EMBL:EKQ15293.1};; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
Lysyl aminopeptidase n=8 Tax=Lactobacillus casei group RepID=K6RI29_LACCA
aminopeptidase N
L3_072_000G1_scaffold_577_18
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20351..25861
DNA (5511bp) protein (1837aa)
Cell-envelope associated proteinase n=2 Tax=Lactobacillus casei group RepID=K0N241_LACCA
cell-envelope associated proteinase
Cell-envelope associated proteinase {ECO:0000313|EMBL:CCK21487.1}; TaxID=1215914 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei W56.;"
L3_072_000G1_scaffold_577_19
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26403..33113
DNA (6711bp) protein (2237aa)
Putative cell-wall-anchored protein {ECO:0000313|EMBL:EKQ15291.1}; EC=3.4.21.- {ECO:0000313|EMBL:EKQ15291.1};; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
Dumpy n=7 Tax=Lactobacillus casei group RepID=S2P4P1_LACPA
peptidase S8
L3_072_000G1_scaffold_577_20
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33303..33932)
DNA (630bp) protein (210aa)
Uncharacterized protein n=10 Tax=Lactobacillus casei group RepID=S2PJD0_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EPC87313.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
hypothetical protein
L3_072_000G1_scaffold_577_21
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33871..35019)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=5 Tax=Lactobacillus casei group RepID=Q03BV6_LACC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC57311.1}; TaxID=1256202 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei CNCM I-4270.;"
L3_072_000G1_scaffold_577_22
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(35049..35897)
DNA (849bp) protein (283aa)
ATP-binding component of an ABC superfamily transporter n=3 Tax=Lactobacillus casei group RepID=K6QQ03_LACCA
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EPC38760.1}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
metal ion ABC transporter ATPase
L3_072_000G1_scaffold_577_23
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(36000..37115)
DNA (1116bp) protein (372aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
Two-component system, signal transduction histidine kinase n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2NVN3_LACPA
Histidine kinase
L3_072_000G1_scaffold_577_24
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(37103..37801)
DNA (699bp) protein (233aa)
Uncharacterized protein n=6 Tax=Lactobacillus casei group RepID=K6SWT3_LACCA
Two-component system, response regulator, OmpR family {ECO:0000313|EMBL:EPC28108.1}; TaxID=1256221 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp22.;"
DNA-binding response regulator
L3_072_000G1_scaffold_577_25
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(38097..39713)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=3 Tax=Lactobacillus casei group RepID=K6QZQ9_LACCA
Uncharacterized protein {ECO:0000313|EMBL:EPC38764.1}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
ABC transporter ATP-binding protein
L3_072_000G1_scaffold_577_26
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(39706..40440)
DNA (735bp) protein (245aa)
ABC-type uncharacterized transport system, ATPase component n=25 Tax=Lactobacillus casei group RepID=Q03BW1_LACC3
ABC transporter ATP-binding protein
ABC transporter ATPase {ECO:0000313|EMBL:EPC87319.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L3_072_000G1_scaffold_577_27
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(40631..40909)
DNA (279bp) protein (93aa)
Pilin-specific sortase n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp17 RepID=S2MX08_LACPA
Sortase {ECO:0000313|EMBL:GAN38007.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
sortase (surface protein transpeptidase)
Displaying 27 items

View Taxonomy