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L3_072_000G1_scaffold_581

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_581_1
unknown

Not on your lists

305..430
DNA (126bp) protein (42aa)

This feature has no annotations

L3_072_000G1_scaffold_581_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(427..1299)
DNA (873bp) protein (291aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C8K5_9CLOT
2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family protein
2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family protein {ECO:0000313|EMBL:AIY82534.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_072_000G1_scaffold_581_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1300..2979)
DNA (1680bp) protein (560aa)
2-oxoacid:acceptor oxidoreductase, alpha subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H277_9CLOT
2-oxoacid:acceptor oxidoreductase, alpha subunit
2-oxoacid:acceptor oxidoreductase, alpha subunit {ECO:0000313|EMBL:AIY83379.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_072_000G1_scaffold_581_4
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4714..4875
DNA (162bp) protein (54aa)
Rubredoxin n=1 Tax=Clostridium sp. DL-VIII RepID=G7MC14_9CLOT
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
rubredoxin-type Fe(Cys)4 protein
L3_072_000G1_scaffold_581_5
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5022..5234)
DNA (213bp) protein (71aa)
Multicopper oxidase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q5P2_9CLOT
multicopper oxidase
Multicopper oxidase {ECO:0000313|EMBL:CDM67601.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_072_000G1_scaffold_581_6
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5662..6609
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPJ5_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41606.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_000G1_scaffold_581_7

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6741..6923
DNA (183bp) protein (61aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1R176_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ16504.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ssp; small, acid-soluble spore protein 1
L3_072_000G1_scaffold_581_8
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7120..8073
DNA (954bp) protein (318aa)
ABC-type metal ion transporter, periplasmic subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7M431_9CLOT
ABC-type metal ion transporter, periplasmic subunit {ECO:0000313|EMBL:EHJ00944.1}; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
periplasmic solute binding protein
L3_072_000G1_scaffold_581_9
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8538..10340
DNA (1803bp) protein (601aa)
DNA mismatch repair protein MutS domain protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAC7_9CLOT
DNA mismatch repair protein MutS domain protein {ECO:0000313|EMBL:EHJ02038.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
mutS4; DNA mismatch repair protein MutS
L3_072_000G1_scaffold_581_10
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10371..11300
DNA (930bp) protein (310aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAC6_9CLOT
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:EHJ02037.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
exonuclease, RNase T and DNA polymerase III
L3_072_000G1_scaffold_581_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11458..11907
DNA (450bp) protein (150aa)
CBS-domain-containing membrane protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MM61_CLOSA
CBS-domain-containing membrane protein
CBS-domain-containing membrane protein {ECO:0000313|EMBL:AGX41613.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_000G1_scaffold_581_12
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11939..12589)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T5V8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ55083.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_072_000G1_scaffold_581_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12599..13252)
DNA (654bp) protein (218aa)
Phage shock protein A (IM30), suppresses sigma54-dependent transcription n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAC8_9CLOT
phage shock protein A (PspA) family protein
Phage shock protein A (IM30), suppresses sigma54-dependent transcription {ECO:0000313|EMBL:EKQ55084.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L3_072_000G1_scaffold_581_14
unknown

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13454..14050
DNA (597bp) protein (199aa)

This feature has no annotations

L3_072_000G1_scaffold_581_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14310..15461
DNA (1152bp) protein (384aa)
ispH1; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH (EC:1.17.1.2)
Ribosomal protein S1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J7I2_CLOBU
30S ribosomal protein S1 {ECO:0000313|EMBL:KHD14499.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L3_072_000G1_scaffold_581_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15524..16942)
DNA (1419bp) protein (473aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Pyruvate kinase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3Y4_CLOBU
pyruvate kinase
L3_072_000G1_scaffold_581_17
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17361..18887
DNA (1527bp) protein (509aa)
pepD; cytosol non-specific dipeptidase PepD (EC:3.4.13.18)
Cytosol non-specific dipeptidase PepD {ECO:0000313|EMBL:AGX41620.1}; EC=3.4.13.18 {ECO:0000313|EMBL:AGX41620.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Cytosol non-specific dipeptidase PepD n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLZ6_CLOSA
L3_072_000G1_scaffold_581_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19065..19742
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQB8_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41622.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_000G1_scaffold_581_19
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19951..20517
DNA (567bp) protein (189aa)
septum formation protein Maf n=1 Tax=Clostridium beijerinckii RepID=UPI0003187492
Maf-like protein LF65_00560 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Maf-like protein
L3_072_000G1_scaffold_581_20
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20647..21336
DNA (690bp) protein (230aa)
DNA repair protein Radc n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLE0_CLOSA
radc; DNA repair protein Radc
DNA repair protein Radc {ECO:0000313|EMBL:AGX41624.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_000G1_scaffold_581_21
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21359..22378
DNA (1020bp) protein (340aa)
Rod shape-determining protein MreB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MM03_CLOSA
mreB; Rod shape-determining protein MreB
Rod shape-determining protein MreB {ECO:0000313|EMBL:AGX41625.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_000G1_scaffold_581_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22383..23240
DNA (858bp) protein (286aa)
Cell shape-determining protein MreC n=4 Tax=Clostridium butyricum RepID=B1R193_CLOBU
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
mreC; rod shape-determining protein MreC
L3_072_000G1_scaffold_581_23
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23250..23750
DNA (501bp) protein (167aa)
Rod shape-determining protein MreD n=2 Tax=Clostridium RepID=A6LQQ1_CLOB8
rod shape-determining protein MreD
Rod shape-determining protein MreD {ECO:0000313|EMBL:ETD71120.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L3_072_000G1_scaffold_581_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23744..26731
DNA (2988bp) protein (996aa)
Penicillin-binding protein, transpeptidase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J7H3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96846.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
penicillin-binding Protein dimerisation domain family
L3_072_000G1_scaffold_581_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26861..27544
DNA (684bp) protein (228aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLE5_CLOSA
sfsA; sugar fermentation stimulation protein
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_000G1_scaffold_581_26
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27700..28356
DNA (657bp) protein (219aa)
Probable septum site-determining protein MinC n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T5X0_9CLOT
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
minC; septum site-determining protein MinC
L3_072_000G1_scaffold_581_27
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28378..29175
DNA (798bp) protein (266aa)
Septum site-determining protein MinD n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPL5_CLOSA
minD; septum site-determining protein MinD
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_000G1_scaffold_581_28
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29188..29457
DNA (270bp) protein (90aa)
Cell division topological specificity factor n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TS11_9CLOT
minE; cell division topological specificity factor MinE
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L3_072_000G1_scaffold_581_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29613..30818
DNA (1206bp) protein (402aa)
cell division protein FtsW n=1 Tax=Clostridium botulinum RepID=UPI0003776763
Rod shape-determining protein RodA {ECO:0000313|EMBL:AIY80178.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
stage V sporulation protein E
L3_072_000G1_scaffold_581_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31146..31622
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEE7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31149.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
Displaying items 1-30 of 39 in total

View Taxonomy