ggKbase home page

L3_072_000G1_scaffold_584

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_584_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2..637
DNA (636bp) protein (212aa)
ATPase P (EC:3.6.3.4)
UPI0003D5AEAE related cluster n=1 Tax=unknown RepID=UPI0003D5AEAE
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ETI87334.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_072_000G1_scaffold_584_2
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(679..936)
DNA (258bp) protein (86aa)
UPI0003D5E01D related cluster n=1 Tax=unknown RepID=UPI0003D5E01D
Uncharacterized protein {ECO:0000313|EMBL:KGF11979.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
L3_072_000G1_scaffold_584_3
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(946..2217)
DNA (1272bp) protein (424aa)
UPI0003D5EBE8 related cluster n=1 Tax=unknown RepID=UPI0003D5EBE8
Transcriptional regulator {ECO:0000313|EMBL:KGF11980.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
L3_072_000G1_scaffold_584_4
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2238..2753)
DNA (516bp) protein (172aa)
UPI0003D64988 related cluster n=1 Tax=unknown RepID=UPI0003D64988
Uncharacterized protein {ECO:0000313|EMBL:KGF11981.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
flavin-nucleotide-binding protein
L3_072_000G1_scaffold_584_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2750..3517)
DNA (768bp) protein (256aa)
UPI0003D5AA07 related cluster n=1 Tax=unknown RepID=UPI0003D5AA07
Hydrolase of the alpha/beta family protein {ECO:0000313|EMBL:ETI88147.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_072_000G1_scaffold_584_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3793..5844
DNA (2052bp) protein (684aa)
Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.2)
UPI0003D59244 related cluster n=1 Tax=unknown RepID=UPI0003D59244
Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:ETI86719.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_072_000G1_scaffold_584_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5860..6732
DNA (873bp) protein (291aa)
UPI0003D681C6 related cluster n=1 Tax=unknown RepID=UPI0003D681C6
Uncharacterized protein {ECO:0000313|EMBL:ETI86720.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
haloacid dehalogenase
L3_072_000G1_scaffold_584_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6808..7458)
DNA (651bp) protein (217aa)
UPI0003D6101C related cluster n=1 Tax=unknown RepID=UPI0003D6101C
Uncharacterized protein {ECO:0000313|EMBL:ETI86721.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_072_000G1_scaffold_584_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7527..7652)
DNA (126bp) protein (42aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI86722.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_072_000G1_scaffold_584_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7688..7801)
DNA (114bp) protein (38aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI86723.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_072_000G1_scaffold_584_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7804..8772)
DNA (969bp) protein (323aa)
UPI0003D68CE5 related cluster n=1 Tax=unknown RepID=UPI0003D68CE5
UPF0365 protein Q612_NSC00282G0007 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_072_000G1_scaffold_584_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9183..9644
DNA (462bp) protein (154aa)
UPI0003D5E2C6 related cluster n=1 Tax=unknown RepID=UPI0003D5E2C6
Uncharacterized protein {ECO:0000313|EMBL:ETI86727.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_072_000G1_scaffold_584_13
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9670..13332
DNA (3663bp) protein (1221aa)
UPI0003D67E93 related cluster n=1 Tax=unknown RepID=UPI0003D67E93
Uncharacterized protein {ECO:0000313|EMBL:KGF11988.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
cobN; cobalt insertion protein CobN
L3_072_000G1_scaffold_584_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13393..14352
DNA (960bp) protein (320aa)
UPI0003D62947 related cluster n=1 Tax=unknown RepID=UPI0003D62947
Uncharacterized protein {ECO:0000313|EMBL:ETI88731.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
conserved membrane protein of unknown function
L3_072_000G1_scaffold_584_15
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14463..16046)
DNA (1584bp) protein (528aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I166_CLOCE
ABC transporter permease {ECO:0000313|EMBL:KGF11989.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
glycine betaine ABC transporter substrate-binding protein
L3_072_000G1_scaffold_584_16
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16340..17917)
DNA (1578bp) protein (526aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8J0_CLOSW
ABC transporter permease {ECO:0000313|EMBL:KGF11991.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
glycine betaine ABC transporter substrate-binding protein
L3_072_000G1_scaffold_584_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17914..19113)
DNA (1200bp) protein (400aa)
glycine/betaine/L-proline ABC transporter ATPase (EC:3.6.3.25)
UPI0003D63EC3 related cluster n=1 Tax=unknown RepID=UPI0003D63EC3
Glycine betaine/L-proline ABC transporter, ATPase subunit {ECO:0000313|EMBL:ETI86305.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_072_000G1_scaffold_584_18
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19366..19887
DNA (522bp) protein (174aa)
UPI0003D5F5BB related cluster n=1 Tax=unknown RepID=UPI0003D5F5BB
Proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:KGF11993.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
yuaJ; YuaJ
L3_072_000G1_scaffold_584_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20087..21469)
DNA (1383bp) protein (461aa)
UPI0003D678B5 related cluster n=1 Tax=unknown RepID=UPI0003D678B5
Uncharacterized protein {ECO:0000313|EMBL:ETI86303.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
anaerobic c4-dicarboxylate antiporter, DcuC family
L3_072_000G1_scaffold_584_20
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21677..22021)
DNA (345bp) protein (115aa)
UPI0003D61D0E related cluster n=1 Tax=unknown RepID=UPI0003D61D0E
Arsenical resistance operon repressor {ECO:0000313|EMBL:ETI86302.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ArsR family transcriptional regulator
L3_072_000G1_scaffold_584_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22366..23625)
DNA (1260bp) protein (420aa)
UPI0003D63B78 related cluster n=1 Tax=unknown RepID=UPI0003D63B78
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:ETI86301.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
gltT; Proton/sodium-glutamate symport protein
L3_072_000G1_scaffold_584_22
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24120..25406)
DNA (1287bp) protein (429aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D68B3C related cluster n=1 Tax=unknown RepID=UPI0003D68B3C
adenylosuccinate synthetase
L3_072_000G1_scaffold_584_23
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25425..26717)
DNA (1293bp) protein (431aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D61749 related cluster n=1 Tax=unknown RepID=UPI0003D61749
adenylosuccinate lyase
L3_072_000G1_scaffold_584_24
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26710..28113)
DNA (1404bp) protein (468aa)
UPI0003D62614 related cluster n=1 Tax=unknown RepID=UPI0003D62614
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KGF11999.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
FAD dependent oxidoreductase
L3_072_000G1_scaffold_584_25
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28347..29036)
DNA (690bp) protein (230aa)
UPI0003D5E6ED related cluster n=1 Tax=unknown RepID=UPI0003D5E6ED
Uncharacterized protein {ECO:0000313|EMBL:KGF12000.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
L3_072_000G1_scaffold_584_26
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29033..29407)
DNA (375bp) protein (125aa)
UPI0003D69B9B related cluster n=1 Tax=unknown RepID=UPI0003D69B9B
Uncharacterized protein {ECO:0000313|EMBL:KGF12001.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
LrgA family protein
L3_072_000G1_scaffold_584_27
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29533..30453
DNA (921bp) protein (307aa)
UPI0003D62349 related cluster n=1 Tax=unknown RepID=UPI0003D62349
Uncharacterized protein {ECO:0000313|EMBL:KGF12002.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
LysR family transcriptional regulator
L3_072_000G1_scaffold_584_28
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30629..31162)
DNA (534bp) protein (178aa)
UPI0003D5F92E related cluster n=1 Tax=unknown RepID=UPI0003D5F92E
Methylated-DNA-protein-cysteine S-methyltransferase {ECO:0000313|EMBL:ETI88323.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
methylated-DNA--protein-cysteine methyltransferase
L3_072_000G1_scaffold_584_29
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31232..31819)
DNA (588bp) protein (196aa)
UPI0003D6646B related cluster n=1 Tax=unknown RepID=UPI0003D6646B
Uncharacterized protein {ECO:0000313|EMBL:ETI88322.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
Exonuclease RNase T and DNA polymerase III
L3_072_000G1_scaffold_584_30
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32173..32880
DNA (708bp) protein (236aa)
UPI0003D5EFD9 related cluster n=1 Tax=unknown RepID=UPI0003D5EFD9
Uncharacterized protein {ECO:0000313|EMBL:ETI88321.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
Displaying items 1-30 of 37 in total

View Taxonomy