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L3_072_000G1_scaffold_608

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_608_1
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..711
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IK34_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES68144.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
site-specific recombinase XerD
L3_072_000G1_scaffold_608_2
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

933..2687
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Finegoldia magna ACS-171-V-Col3 RepID=D9PNT3_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EFK94695.1}; TaxID=768713 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ACS-171-V-Col3.;"
hypothetical protein
L3_072_000G1_scaffold_608_3
Bacteroides finegoldii CAG:203, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2789..3328)
DNA (540bp) protein (180aa)
Putative transmembrane protein n=1 Tax=Bacteroides finegoldii CAG:203 RepID=R6RTR0_9BACE
Putative transmembrane protein {ECO:0000313|EMBL:CDC52343.1}; TaxID=1263045 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides finegoldii CAG:203.;"
putative transmembrane protein
L3_072_000G1_scaffold_608_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3333..4544)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LG87_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAH06854.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
L3_072_000G1_scaffold_608_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4541..4960)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LG86_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAH06855.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
L3_072_000G1_scaffold_608_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5275..6345)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LG85_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAH06856.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
L3_072_000G1_scaffold_608_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6348..6722)
DNA (375bp) protein (125aa)
Putative excisionase n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LG84_BACFN
DNA binding , excisionase family domain protein {ECO:0000313|EMBL:EXZ54819.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
xis; putative excisionase
L3_072_000G1_scaffold_608_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6823..7356)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YIY7_ALIFI
Putative transmembrane protein {ECO:0000313|EMBL:EXY28418.1}; TaxID=1339284 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T10.;"
hypothetical protein
L3_072_000G1_scaffold_608_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7343..7570)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii CAG:203 RepID=R6S3Z9_9BACE
Putative transmembrane protein {ECO:0000313|EMBL:EXY28418.1}; TaxID=1339284 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T10.;"
hypothetical protein
L3_072_000G1_scaffold_608_10
Bacteroides finegoldii CAG:203, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7740..8855)
DNA (1116bp) protein (372aa)
Putative bacteriophage integrase n=1 Tax=Bacteroides finegoldii CAG:203 RepID=R6RXA6_9BACE
Putative bacteriophage integrase {ECO:0000313|EMBL:CDC52350.1}; TaxID=1263045 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides finegoldii CAG:203.;"
int; putative bacteriophage integrase
L3_072_000G1_scaffold_608_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8972..9850)
DNA (879bp) protein (293aa)
Putative transposase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WQC6_BACF6
putative transposase
DNA binding , excisionase family domain protein {ECO:0000313|EMBL:EXZ54822.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_072_000G1_scaffold_608_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10111..11508)
DNA (1398bp) protein (466aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
tRNA modification GTPase MnmE n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VBP9_9BACE
tRNA modification GTPase trmE
L3_072_000G1_scaffold_608_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11575..12228
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q1M6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22738.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
two-component system sensor histidine kinase
L3_072_000G1_scaffold_608_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12307..12498
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EQX5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22739.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
two-component system sensor histidine kinase
L3_072_000G1_scaffold_608_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12579..13238
DNA (660bp) protein (220aa)
NAD dependent epimerase/dehydratase family protein n=2 Tax=Bacteroides caccae RepID=A5ZGJ7_9BACE
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EDM20556.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000G1_scaffold_608_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13375..14253)
DNA (879bp) protein (293aa)
Phosphorylase family n=2 Tax=Bacteroides caccae RepID=A5ZGJ8_9BACE
Phosphorylase family {ECO:0000313|EMBL:EDM20557.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
purine nucleoside phosphorylase II
L3_072_000G1_scaffold_608_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14411..15412)
DNA (1002bp) protein (334aa)
UPF0365 protein BACCAC_02017 n=4 Tax=root RepID=A5ZGJ9_9BACE
UPF0365 protein BN535_00108 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000G1_scaffold_608_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15435..15905)
DNA (471bp) protein (157aa)
Nodulation efficiency protein D n=3 Tax=Bacteroides RepID=A5ZGK0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72112.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000G1_scaffold_608_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15921..17342)
DNA (1422bp) protein (474aa)
WD40-like protein n=2 Tax=Bacteroides RepID=A5ZGK1_9BACE
WD40-like protein {ECO:0000313|EMBL:CCZ72111.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
WD40-like Beta Propeller Repeat.
L3_072_000G1_scaffold_608_20
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17526..18272
DNA (747bp) protein (249aa)
PP-loop family protein n=2 Tax=Bacteroides RepID=A5ZGK2_9BACE
PP-loop family protein {ECO:0000313|EMBL:CCZ72110.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
L3_072_000G1_scaffold_608_21
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18288..18659
DNA (372bp) protein (124aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZGK3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72109.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000G1_scaffold_608_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18805..19821)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8VBQ8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72108.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Membrane-associated lipoprotein involved in thiamine biosynthesis
L3_072_000G1_scaffold_608_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19858..20439)
DNA (582bp) protein (194aa)
Putative manganese efflux pump MntP n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UTQ7_9BACE
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Predicted membrane protein
L3_072_000G1_scaffold_608_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20446..21246)
DNA (801bp) protein (267aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZGK6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22749.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000G1_scaffold_608_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21754..22704)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V8J0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22750.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Glycosyltransferases involved in cell wall biogenesis
L3_072_000G1_scaffold_608_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22735..23250)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q0Z4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22751.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000G1_scaffold_608_27
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23593..24678)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UDZ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73884.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000G1_scaffold_608_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24686..25099)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q1N9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22753.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000G1_scaffold_608_29
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25096..25659)
DNA (564bp) protein (188aa)
Sigma-70 region 2 n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UYV3_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:CCZ73882.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase ECF-type sigma factor
L3_072_000G1_scaffold_608_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25794..27074)
DNA (1281bp) protein (427aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=2 Tax=Bacteroides RepID=I8V8J8_9BACE
Displaying items 1-30 of 81 in total

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