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L3_072_000G1_scaffold_616

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_616_1
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..919
DNA (918bp) protein (306aa)
Conserved domain protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PU49_9BACE
RHS repeat-associated core domain protein {ECO:0000313|EMBL:KDS48095.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
RHS repeat-associated core domain
L3_072_000G1_scaffold_616_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

921..1373
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V6S1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS48094.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
L3_072_000G1_scaffold_616_3
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1462..3327
DNA (1866bp) protein (622aa)
RHS repeat-associated core domain protein n=1 Tax=Bacteroides sp. D20 RepID=D2EX73_9BACE
RHS repeat-associated core domain protein {ECO:0000313|EMBL:EFA20259.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
RHS repeat-associated core domain
L3_072_000G1_scaffold_616_4

Not on your lists

3340..3747
DNA (408bp) protein (136aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1U7C8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC81162.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_072_000G1_scaffold_616_5
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4090..5583
DNA (1494bp) protein (498aa)
RHS repeat-associated core domain protein n=1 Tax=Bacteroides sp. D20 RepID=D2EX73_9BACE
RHS repeat-associated core domain protein {ECO:0000313|EMBL:EFA20259.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
RHS repeat-associated core domain
L3_072_000G1_scaffold_616_6
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5549..5905
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EX74_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA20260.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
RHS repeat-associated core domain
L3_072_000G1_scaffold_616_7
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5909..6181
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EX75_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA20261.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
L3_072_000G1_scaffold_616_8
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6509..6928)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EX76_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA20262.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
yjgA; hypothetical protein
L3_072_000G1_scaffold_616_9

Not on your lists

7083..7244
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=root RepID=D2EX77_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKC63719.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_072_000G1_scaffold_616_10
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7315..7905
DNA (591bp) protein (197aa)
TIGR00730 family protein n=1 Tax=Bacteroides sp. D20 RepID=D2EX78_9BACE
TIGR00730 family protein {ECO:0000313|EMBL:EFA20264.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_072_000G1_scaffold_616_11
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7902..8633
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7ELL2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE03321.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_072_000G1_scaffold_616_12
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8638..9390
DNA (753bp) protein (251aa)
Uroporphyrinogen-III synthase n=6 Tax=root RepID=D2EX80_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE03319.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
uroporphyrinogen-III synthase
L3_072_000G1_scaffold_616_13
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9596..10012
DNA (417bp) protein (139aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
Ribonuclease P protein component n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EPA6_9BACE
ribonuclease P protein component
L3_072_000G1_scaffold_616_14
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10009..10230
DNA (222bp) protein (74aa)
Putative membrane protein insertion efficiency factor n=6 Tax=Bacteroides RepID=A7V9D4_BACUN
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L3_072_000G1_scaffold_616_15
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10227..10892
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I8ZP08_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY75504.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
TatD-related deoxyribonuclease
L3_072_000G1_scaffold_616_16
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11000..12292
DNA (1293bp) protein (431aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=4 Tax=root RepID=I9U109_BACUN
L3_072_000G1_scaffold_616_17
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13032..13184
DNA (153bp) protein (51aa)
putative 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 1 family protein n=4 Tax=Bacteroides RepID=A7V9D1_BACUN
5-keto-4-deoxyuronate isomerase {ECO:0000313|EMBL:CDE03308.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
L3_072_000G1_scaffold_616_18
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13223..14026
DNA (804bp) protein (268aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.69)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=6 Tax=Bacteroides RepID=A7V9D0_BACUN
Short chain dehydrogenase {ECO:0000313|EMBL:EFV27423.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
L3_072_000G1_scaffold_616_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14201..15433
DNA (1233bp) protein (411aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=D2EX87_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY75500.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L3_072_000G1_scaffold_616_20
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15512..16144)
DNA (633bp) protein (211aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides sp. D20 RepID=D2EX88_9BACE
Response regulator receiver domain protein {ECO:0000313|EMBL:EFA20274.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
LuxR family transcriptional regulator
L3_072_000G1_scaffold_616_21
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16141..18030)
DNA (1890bp) protein (630aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bacteroides RepID=A7V9C6_BACUN
Hsp90-like protein {ECO:0000313|EMBL:EFV27427.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
signal transduction histidine kinase
L3_072_000G1_scaffold_616_22
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18352..19248
DNA (897bp) protein (299aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7V9C3_BACUN
YD repeat (Two copies) {ECO:0000313|EMBL:CDE03301.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
putative lipoprotein
L3_072_000G1_scaffold_616_23
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19392..20048)
DNA (657bp) protein (219aa)
Polysaccharide deacetylase n=8 Tax=root RepID=A7V9C1_BACUN
Polysaccharide deacetylase {ECO:0000313|EMBL:EFA20277.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
polysaccharide deacetylase
L3_072_000G1_scaffold_616_24
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20193..23537)
DNA (3345bp) protein (1115aa)
Uncharacterized protein n=7 Tax=root RepID=A7V9C0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV27430.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_072_000G1_scaffold_616_25
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23796..24884
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I2U3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS10539.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L3_072_000G1_scaffold_616_26
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25676..26803)
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V6V8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV27390.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
ATPase
L3_072_000G1_scaffold_616_27
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26997..28418
DNA (1422bp) protein (474aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A7V9B4_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE03296.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_072_000G1_scaffold_616_28
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28561..31095)
DNA (2535bp) protein (845aa)
Glycosyl hydrolase family 9 n=4 Tax=Bacteroides RepID=D2EX99_9BACE
Glycosyl hydrolase family 9 {ECO:0000313|EMBL:EFA20285.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
glycoside hydrolase
L3_072_000G1_scaffold_616_29
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31435..31872
DNA (438bp) protein (146aa)
Cellobiose 2-epimerase {ECO:0000256|HAMAP-Rule:MF_00929}; Short=CE {ECO:0000256|HAMAP-Rule:MF_00929};; EC=5.1.3.11 {ECO:0000256|HAMAP-Rule:MF_00929};; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
Cellobiose 2-epimerase n=2 Tax=Bacteroides uniformis RepID=I8ZKA7_BACUN
N-acylglucosamine 2-epimerase
L3_072_000G1_scaffold_616_30
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31944..32573
DNA (630bp) protein (210aa)
Cellobiose 2-epimerase {ECO:0000256|HAMAP-Rule:MF_00929}; Short=CE {ECO:0000256|HAMAP-Rule:MF_00929};; EC=5.1.3.11 {ECO:0000256|HAMAP-Rule:MF_00929};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Cellobiose 2-epimerase n=1 Tax=Bacteroides sp. D20 RepID=D2EXA0_9BACE
N-acylglucosamine 2-epimerase
Displaying items 1-30 of 58 in total

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