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L3_072_000G1_scaffold_647

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_647_1
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(331..1719)
DNA (1389bp) protein (463aa)
Branched-chain amino acid permease n=10 Tax=Lactobacillus casei group RepID=Q03BH4_LACC3
branched-chain amino acid permease
Branched-chain amino acid permease {ECO:0000313|EMBL:GAN37979.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L3_072_000G1_scaffold_647_2
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2807..3475
DNA (669bp) protein (223aa)
Conserved protein n=20 Tax=Lactobacillus casei group RepID=F2M7A1_LACCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC59923.1}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
L3_072_000G1_scaffold_647_3
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3543..4562
DNA (1020bp) protein (340aa)
Cell surface protein n=18 Tax=Lactobacillus casei group RepID=C5F9V3_LACPA
cell surface protein precursor
Uncharacterized protein {ECO:0000313|EMBL:EEI68144.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L3_072_000G1_scaffold_647_4
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4543..4920
DNA (378bp) protein (126aa)
Uncharacterized protein n=16 Tax=Lactobacillus casei group RepID=K6QFS3_LACCA
Uncharacterized protein {ECO:0000313|EMBL:KGP69205.1}; TaxID=1582 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei.;"
hypothetical protein
L3_072_000G1_scaffold_647_5
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4917..6914
DNA (1998bp) protein (666aa)
Uncharacterized protein n=3 Tax=Lactobacillus casei group RepID=K6Q5K7_LACCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKQ04246.1}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
L3_072_000G1_scaffold_647_6
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7772..8455
DNA (684bp) protein (228aa)
Extracellular protein n=31 Tax=Lactobacillus casei group RepID=F2M7A6_LACCC
WxL domain surface protein {ECO:0000313|EMBL:GAN37974.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
extracellular protein
L3_072_000G1_scaffold_647_7
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8608..8967
DNA (360bp) protein (120aa)
LPXTG-motif cell wall anchor domain protein n=6 Tax=Lactobacillus paracasei subsp. paracasei RepID=C2FDB8_LACPA
cell surface protein
Uncharacterized protein {ECO:0000313|EMBL:EPC53250.1}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
L3_072_000G1_scaffold_647_8
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8948..9652
DNA (705bp) protein (235aa)
Uncharacterized protein n=6 Tax=Lactobacillus casei group RepID=C5F9W1_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EKQ04222.1}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
hypothetical protein
L3_072_000G1_scaffold_647_9
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9814..11838
DNA (2025bp) protein (675aa)
Cell surface complex protein, CscC family n=3 Tax=Lactobacillus paracasei RepID=S2M2G3_LACPA
Cell surface complex protein, CscC family {ECO:0000313|EMBL:EPC13473.1}; TaxID=1256230 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. tolerans Lpl7.;"
hypothetical protein
L3_072_000G1_scaffold_647_10
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11915..12889)
DNA (975bp) protein (325aa)
DMT family Permease n=25 Tax=Lactobacillus casei group RepID=C5F9W3_LACPA
DMT family Permease
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ERN49226.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L3_072_000G1_scaffold_647_11
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13057..14784)
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Lactobacillus casei UW4 RepID=K6SF96_LACCA
Uncharacterized protein {ECO:0000313|EMBL:GAN37969.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
hypothetical protein
L3_072_000G1_scaffold_647_12
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14771..15565)
DNA (795bp) protein (265aa)
nodI; nod factor export ATP-binding protein I (EC:3.6.3.-)
ABC transporter n=1 Tax=Lactobacillus casei 5b RepID=U6SBY5_LACCA
ABC transporter {ECO:0000313|EMBL:ERN49224.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L3_072_000G1_scaffold_647_13
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15817..16365)
DNA (549bp) protein (183aa)
Predicted membrane protein n=44 Tax=Lactobacillus casei group RepID=K0N2S4_LACCA
substrate-specific component of predicted pyridoxine ECF transporter
Membrane protein {ECO:0000313|EMBL:ERN49223.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L3_072_000G1_scaffold_647_14
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16413..17237)
DNA (825bp) protein (275aa)
Phosphomethylpyrimidine kinase type-1 n=17 Tax=Lactobacillus casei group RepID=B3W8E1_LACCB
Putative pyridoxamine kinase
Pyridoxal kinase {ECO:0000313|EMBL:AGP67450.1}; TaxID=1318635 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei LOCK919.;"
L3_072_000G1_scaffold_647_15
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17536..18408)
DNA (873bp) protein (291aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1435040 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 1981.;"
Methylenetetrahydrofolate reductase n=37 Tax=Lactobacillus casei group RepID=B3W8E2_LACCB
metF; Methylenetetrahydrofolate reductase
L3_072_000G1_scaffold_647_16
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18386..20671)
DNA (2286bp) protein (762aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=4 Tax=Lactobacillus casei group RepID=C5F9W9_LACPA
L3_072_000G1_scaffold_647_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21443..21874
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C8UV74_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI42278.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_072_000G1_scaffold_647_18
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21932..23650
DNA (1719bp) protein (573aa)
lipid A export ATP-binding/permease protein (EC:3.6.1.3)
Lipid A export ATP-binding/permease protein {ECO:0000313|EMBL:EKQ03994.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EKQ03994.1};; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
ABC-type multidrug transport system n=3 Tax=Lactobacillus casei group RepID=C5F9X0_LACPA
L3_072_000G1_scaffold_647_19
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23655..25436
DNA (1782bp) protein (594aa)
ABC-type multidrug transport system, ATPase and permease component n=32 Tax=Lactobacillus casei group RepID=B3W8E6_LACCB
Multidrug/protein/lipid ABC transporter, ATP-binding and permease protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:EPC90768.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L3_072_000G1_scaffold_647_20
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25598..26842
DNA (1245bp) protein (415aa)
Oxalate/formate Antiporter n=10 Tax=Lactobacillus casei group RepID=C5F9X2_LACPA
oxalate/formate Antiporter
Oxalate/formate Antiporter {ECO:0000313|EMBL:EEQ67238.1}; TaxID=537973 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei 8700:2.;"
L3_072_000G1_scaffold_647_21
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27129..27845
DNA (717bp) protein (239aa)
Transcription regulator n=30 Tax=Lactobacillus casei group RepID=B3W6X8_LACCB
GntR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ERN49216.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L3_072_000G1_scaffold_647_22
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28071..29717
DNA (1647bp) protein (549aa)
trehalose-6-phosphate hydrolase (EC:3.2.1.93)
Alpha,alpha-phosphotrehalase n=2 Tax=Lactobacillus casei group RepID=C5F9X4_LACPA
Alpha,alpha-phosphotrehalase {ECO:0000313|EMBL:EEQ67240.1}; TaxID=537973 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei 8700:2.;"
L3_072_000G1_scaffold_647_23
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29808..31811
DNA (2004bp) protein (668aa)
PTS system trehalose-specific IIBCA components (EC:2.7.1.69)
PTS system protein n=4 Tax=Lactobacillus casei group RepID=T1TFF3_LACPA
PTS system protein {ECO:0000313|EMBL:AGT63636.1}; TaxID=537973 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei 8700:2.;"
L3_072_000G1_scaffold_647_24
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32153..33457
DNA (1305bp) protein (435aa)
Serine/threonine transporter SstT n=33 Tax=Lactobacillus casei group RepID=SSTT_LACC3
Dicarboxylate/amino acid:cation Na+ or H+ symporter
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L3_072_000G1_scaffold_647_25
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33679..35154
DNA (1476bp) protein (492aa)
Amino acid transporter n=2 Tax=Lactobacillus casei RepID=K6Q4U7_LACCA
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:EKQ04001.1}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
L3_072_000G1_scaffold_647_26
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(35280..36218)
DNA (939bp) protein (313aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L-lactate dehydrogenase n=40 Tax=Lactobacillus casei group RepID=C5F9X9_LACPA
L-lactate dehydrogenase
L3_072_000G1_scaffold_647_27
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

36500..37840
DNA (1341bp) protein (447aa)
Glutamate dehydrogenase n=2 Tax=Lactobacillus casei group RepID=C5F9Y0_LACPA
NADP-specific glutamate dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
L3_072_000G1_scaffold_647_28
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

38013..38213
DNA (201bp) protein (67aa)
Cold shock protein A n=70 Tax=Lactobacillus RepID=B3W6Y5_LACCB
csp; Cold shock protein 1
Cold-shock protein {ECO:0000313|EMBL:ERN49209.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
Displaying 28 items

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