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L3_072_000G1_scaffold_648

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_648_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(192..1094)
DNA (903bp) protein (301aa)
Foldase protein PrsA {ECO:0000256|HAMAP-Rule:MF_01145}; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_01145};; Flags: Precursor;; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Foldase protein PrsA n=11 Tax=Lactobacillus rhamnosus RepID=C7TDI2_LACRG
prsA; peptidylprolyl cis-trans isomerase PrsA1
L3_072_000G1_scaffold_648_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1242..1601)
DNA (360bp) protein (120aa)
Conserved protein n=11 Tax=Lactobacillus rhamnosus RepID=C7TDI1_LACRG
ytxH-like family protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74450.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_648_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1604..2032)
DNA (429bp) protein (143aa)
HIT family protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TK65_LACRL
hit; HIT family protein
Histidine triad (HIT) nucleotide-binding protein {ECO:0000313|EMBL:AGP74449.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_648_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2130..2861
DNA (732bp) protein (244aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEN80102.1}; EC=3.6.3.25 {ECO:0000313|EMBL:EEN80102.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
ABC-type transporter ATP-binding protein EcsA n=3 Tax=Lactobacillus rhamnosus RepID=G7V2G3_LACRH
ABC transporter, ATP-binding protein EcsA
L3_072_000G1_scaffold_648_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2858..4072
DNA (1215bp) protein (405aa)
Bacterial ABC transporter EcsB family protein n=4 Tax=Lactobacillus rhamnosus RepID=G7V2G2_LACRH
bacterial ABC transporter EcsB family protein
ABC transporter, permease protein EscB {ECO:0000313|EMBL:AGP74447.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_648_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4561..5334
DNA (774bp) protein (258aa)
Choline kinase-like enzyme n=11 Tax=Lactobacillus rhamnosus RepID=B5QRD9_LACRH
phosphotransferase enzyme family protein
Aminoglycoside phosphotransferase family protein {ECO:0000313|EMBL:AGP74445.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_648_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5466..6110
DNA (645bp) protein (215aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
tRNA (guanine-N(7)-)-methyltransferase n=12 Tax=Lactobacillus rhamnosus RepID=B5QRE0_LACRH
trmB; tRNA (guanine-N(7)-)-methyltransferase
L3_072_000G1_scaffold_648_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6180..6518)
DNA (339bp) protein (113aa)
Conserved secreted protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TK58_LACRL
putative small secreted protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74442.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_648_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6801..7118
DNA (318bp) protein (106aa)
tRNA binding domain protein n=14 Tax=Lactobacillus rhamnosus RepID=C7TK57_LACRL
pheT; tRNA binding domain-containing protein
Thiol-disulfide isomerase and thioredoxin {ECO:0000313|EMBL:EKS52879.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_000G1_scaffold_648_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7133..7771
DNA (639bp) protein (213aa)
tRNA binding domain protein n=14 Tax=Lactobacillus rhamnosus RepID=C7TK57_LACRL
pheT; tRNA binding domain-containing protein
Phenylalanyl-tRNA synthetase domain protein {ECO:0000313|EMBL:AGP74440.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_648_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7882..8133)
DNA (252bp) protein (84aa)
Conserved protein n=3 Tax=Lactobacillus rhamnosus RepID=C7TK56_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN80094.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_000G1_scaffold_648_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8439..10658
DNA (2220bp) protein (740aa)
Cell division protein, DNA segregation ATPase FtsK/SpoIIIE related protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TK55_LACRL
ftsK/SpoIIIE family protein
Cell division protein FtsK {ECO:0000313|EMBL:AGP74439.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_648_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10658..10855
DNA (198bp) protein (66aa)
DNA segregation ATPase FtsK/SpoIIIE related protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QRE5_LACRH
ftsk gamma domain protein
Cell division protein FtsK {ECO:0000313|EMBL:EKS52877.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_000G1_scaffold_648_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10855..12165
DNA (1311bp) protein (437aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
UDP-N-acetylmuramate--L-alanine ligase n=5 Tax=Lactobacillus RepID=C8UV27_LACRG
UDP-N-acetylmuramate-alanine ligase
L3_072_000G1_scaffold_648_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12506..14011
DNA (1506bp) protein (502aa)
HTH domain protein n=3 Tax=Lactobacillus rhamnosus RepID=G7V2F0_LACRH
HTH domain protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74436.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_648_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14426..17956
DNA (3531bp) protein (1177aa)
Uncharacterized protein n=3 Tax=Lactobacillus rhamnosus RepID=S5A761_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74435.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_648_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17988..18776
DNA (789bp) protein (263aa)
Cell surface protein n=4 Tax=Lactobacillus rhamnosus RepID=G7V2E8_LACRH
cell surface protein
Cell surface protein {ECO:0000313|EMBL:AGP74434.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_648_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18810..19148
DNA (339bp) protein (113aa)
Conserved protein n=3 Tax=Lactobacillus rhamnosus RepID=C7TK49_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN80087.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_000G1_scaffold_648_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19163..20218
DNA (1056bp) protein (352aa)
Cell surface protein n=2 Tax=Lactobacillus rhamnosus RepID=C7TK48_LACRL
yqbJ; cell surface protein
Cell surface protein {ECO:0000313|EMBL:EKS52871.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_000G1_scaffold_648_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21060..21770
DNA (711bp) protein (237aa)
Integral membrane protein, interacts with FtsH n=8 Tax=Lactobacillus rhamnosus RepID=C7TK47_LACRL
inhibitor of apoptosis-promoting Bax1 family protein
Integral membrane protein, interacts with FtsH {ECO:0000313|EMBL:AGP74431.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_648_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22337..24982
DNA (2646bp) protein (882aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
DNA polymerase n=4 Tax=Lactobacillus rhamnosus RepID=G7V2E3_LACRH
polA; DNA polymerase I family protein
L3_072_000G1_scaffold_648_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24992..25840
DNA (849bp) protein (283aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Formamidopyrimidine-DNA glycosylase n=3 Tax=Lactobacillus rhamnosus RepID=C7TK44_LACRL
mutM; formamidopyrimidine-DNA glycosylase
L3_072_000G1_scaffold_648_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25837..26439
DNA (603bp) protein (201aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Dephospho-CoA kinase n=4 Tax=Lactobacillus rhamnosus RepID=C7TK43_LACRL
coaE; Dephospho-CoA kinase
L3_072_000G1_scaffold_648_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26494..26961
DNA (468bp) protein (156aa)
Transcriptional repressor NrdR n=10 Tax=Lactobacillus RepID=B5QRN1_LACRH
nrdR; transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_000G1_scaffold_648_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27037..28383
DNA (1347bp) protein (449aa)
Replication initiation/membrane attachment protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TK41_LACRL
replication initiation and membrane attachment family protein
Helicase loader DnaB {ECO:0000313|EMBL:AGP74426.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_648_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28383..29318
DNA (936bp) protein (312aa)
Primosomal protein DnaI n=4 Tax=Lactobacillus rhamnosus RepID=C7TDF8_LACRG
primosomal protein DnaI
Helicase loader DnaI {ECO:0000313|EMBL:AGP74425.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_648_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29855..31828
DNA (1974bp) protein (658aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Threonine--tRNA ligase n=5 Tax=Lactobacillus rhamnosus RepID=C7TK39_LACRL
thrS; threonine--tRNA ligase
L3_072_000G1_scaffold_648_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31996..32385
DNA (390bp) protein (130aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TK38_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN80076.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_000G1_scaffold_648_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32378..33073
DNA (696bp) protein (232aa)
Conserved protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TK37_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74422.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_648_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33477..34214
DNA (738bp) protein (246aa)
Uncharacterized protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TK35_LACRL
putative transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EEN80073.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Displaying items 1-30 of 32 in total

View Taxonomy