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L3_072_000G1_scaffold_663

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_663_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

465..1997
DNA (1533bp) protein (511aa)
ABC transporter, permease protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TMM6_LACRL
substrate binding domain of ABC-type glycine betaine transport system family protein
Glycine/betaine ABC transporter permease {ECO:0000313|EMBL:KIC98124.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_663_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1997..2956
DNA (960bp) protein (320aa)
ABC transporter, ATPase component n=5 Tax=Lactobacillus rhamnosus RepID=C7TMM5_LACRL
proV; ABC transporter ATPase
L-proline glycine betaine ABC transport system permease protein ProV {ECO:0000313|EMBL:AGP75300.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_663_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2962..4287
DNA (1326bp) protein (442aa)
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EEN81143.1}; EC=1.8.1.7 {ECO:0000313|EMBL:EEN81143.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Glutathione reductase n=3 Tax=Lactobacillus rhamnosus RepID=C7TMM4_LACRL
pyridine nucleotide-disulfide oxidoreductase family protein
L3_072_000G1_scaffold_663_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5169..6395
DNA (1227bp) protein (409aa)
Transporter, major facilitator superfamily MFS_1 n=6 Tax=Lactobacillus rhamnosus RepID=C7TMM3_LACRL
Hypothetical protein
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEN81144.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_000G1_scaffold_663_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6932..7948
DNA (1017bp) protein (339aa)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:EKS49879.1}; EC=6.1.1.2 {ECO:0000313|EMBL:EKS49879.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Tryptophanyl-tRNA synthetase II n=12 Tax=Lactobacillus rhamnosus RepID=B5QLX1_LACRH
trpS; tryptophan--tRNA ligase
L3_072_000G1_scaffold_663_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8098..8709
DNA (612bp) protein (204aa)
Uncharacterized protein n=13 Tax=Lactobacillus rhamnosus RepID=C8UXC7_LACRG
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS49878.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_000G1_scaffold_663_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8718..9575
DNA (858bp) protein (286aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TMM0_LACRL
Beta-propeller domains of methanol dehydrogenase type
Uncharacterized protein {ECO:0000313|EMBL:EEN81148.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_000G1_scaffold_663_8
unknown

Not on your lists

9675..9923
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus ATCC 21052 RepID=G6ATF8_LACRH
hypothetical protein
L3_072_000G1_scaffold_663_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10010..11365
DNA (1356bp) protein (452aa)
Na-driven multidrug efflux pump n=4 Tax=Lactobacillus rhamnosus RepID=C7TML9_LACRL
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps
Diguanylate cyclase {ECO:0000313|EMBL:KIC98118.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_663_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11499..11993)
DNA (495bp) protein (165aa)
Phosphinothricin N-acetyltransferase n=5 Tax=Lactobacillus rhamnosus RepID=C7TML8_LACRL
ywnH; phosphinothricin N-acetyltransferase
Sortase related acyltransferase {ECO:0000313|EMBL:AGP75293.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_663_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12012..12836)
DNA (825bp) protein (275aa)
SAM-dependent methyltransferase n=8 Tax=Lactobacillus rhamnosus RepID=B5QLX6_LACRH
Hypothetical protein
SAM-dependent methyltransferase {ECO:0000313|EMBL:KIC98116.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_663_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12931..13863)
DNA (933bp) protein (311aa)
Aldo/keto reductase n=3 Tax=Lactobacillus rhamnosus RepID=C7TML6_LACRL
aRA12; aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:KIC98115.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_663_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14224..15753
DNA (1530bp) protein (510aa)
Exopolyphosphatase n=4 Tax=Lactobacillus rhamnosus RepID=C7TML5_LACRL
ppx; exopolyphosphatase
Uncharacterized protein {ECO:0000313|EMBL:EEN81153.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_000G1_scaffold_663_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15750..17912
DNA (2163bp) protein (721aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphate kinase; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Polyphosphate kinase n=6 Tax=Lactobacillus rhamnosus RepID=B5QLX9_LACRH
ppk1; polyphosphate kinase 1
L3_072_000G1_scaffold_663_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17909..18850
DNA (942bp) protein (314aa)
Exopolyphosphatase n=7 Tax=Lactobacillus rhamnosus RepID=C7T7F7_LACRG
exopolyphosphatase
Exopolyphosphatase {ECO:0000313|EMBL:KIC98112.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_663_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18943..19926
DNA (984bp) protein (328aa)
Predicted secreted protein n=7 Tax=Lactobacillus rhamnosus RepID=B5QLY1_LACRH
hypothetical protein
Extracellular protein {ECO:0000313|EMBL:AGP75287.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_663_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19976..20254
DNA (279bp) protein (93aa)
Uncharacterized protein n=9 Tax=Lactobacillus rhamnosus RepID=S4ZWM8_LACRH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75286.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_663_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20356..20865)
DNA (510bp) protein (170aa)
Phospholipid-binding protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TMK9_LACRL
phosphatidylethanolamine-binding family protein
Phospholipid-binding protein {ECO:0000313|EMBL:AGP75285.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_663_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20997..21923
DNA (927bp) protein (309aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TMK8_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC98108.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_663_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22285..22977
DNA (693bp) protein (231aa)
NAD-dependent protein deacetylase, SIR2 family n=10 Tax=Lactobacillus rhamnosus RepID=B5QLY6_LACRH
NAD-dependent protein deacetylase of SIR2 family
NAD-dependent protein deacetylase of SIR2 family {ECO:0000313|EMBL:AGP75282.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_663_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23012..23605
DNA (594bp) protein (198aa)
Conserved membrane protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TMK5_LACRL
hypothetical protein
Putative integral membrane protein {ECO:0000313|EMBL:AGP75281.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_663_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23630..24535
DNA (906bp) protein (302aa)
Enzyme with possible activities of L-2-hydroxyisocaproate/malate/lactate dehydrogenase n=11 Tax=Lactobacillus rhamnosus RepID=B5QLY8_LACRH
hicD; L-2-hydroxyisocaproate dehydrogenase
L-2-hydroxyisocaproate dehydrogenase {ECO:0000313|EMBL:KIC98105.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_663_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24693..25172
DNA (480bp) protein (160aa)
ADP-ribose pyrophosphatase n=4 Tax=Lactobacillus rhamnosus RepID=C7TMK3_LACRL
NUDIX domain-containing protein
MutT/Nudix family protein {ECO:0000313|EMBL:AGP75279.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_663_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25153..25977
DNA (825bp) protein (275aa)
Uracil-xanthine permease, YunF like protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TMK2_LACRL
yunF; uracil-xanthine permease, YunF like protein
Uncharacterized protein {ECO:0000313|EMBL:EEN81165.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_000G1_scaffold_663_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26310..27164
DNA (855bp) protein (285aa)
Proline iminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; Short=PIP {ECO:0000256|PIRNR:PIRNR005539};; EC=3.4.11.5 {ECO:0000256|PIRNR:PIRNR005539};; Prolyl aminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Proline iminopeptidase n=4 Tax=Lactobacillus rhamnosus RepID=S5A4Y2_LACRH
pip; proline iminopeptidase
L3_072_000G1_scaffold_663_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


27683..29665
DNA (1983bp) protein (661aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Methionine--tRNA ligase n=5 Tax=Lactobacillus rhamnosus RepID=C7TMJ7_LACRL
metG; methionine--tRNA ligase
L3_072_000G1_scaffold_663_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29724..30170)
DNA (447bp) protein (149aa)
Conserved protein n=8 Tax=Lactobacillus rhamnosus RepID=C7TMJ6_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN81127.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_000G1_scaffold_663_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30221..30433)
DNA (213bp) protein (71aa)
Transcriptional regulator n=5 Tax=Lactobacillus rhamnosus RepID=C7TMJ5_LACRL
helix-turn-helix family protein
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:KIC98100.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_663_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30597..32510)
DNA (1914bp) protein (638aa)
ABC transporter, multidrug transporter ATPase and permease component n=5 Tax=Lactobacillus rhamnosus RepID=C7TMJ4_LACRL
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AGP75271.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
ABC-type multidrug transport system, ATPase and permease component
L3_072_000G1_scaffold_663_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32497..34323)
DNA (1827bp) protein (609aa)
ABC transporter, multidrug transporter ATPase and permease component n=4 Tax=Lactobacillus rhamnosus RepID=C7TMJ3_LACRL
multidrug ABC transporter ATPase/permease
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC98098.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Displaying items 1-30 of 34 in total

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